Pseudoliparis swirei (Mariana hadal snailfish): 130195386
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Entry
130195386 CDS
T09868
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130195386 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130195386 (neil1)
Enzymes [BR:
pswi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130195386 (neil1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130195386 (neil1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Bacteroid_pep
Motif
Other DBs
NCBI-GeneID:
130195386
NCBI-ProteinID:
XP_056272854
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All DBs
Position
6:12184561..12188368
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AA seq
451 aa
AA seq
DB search
MSIMSSMSVKRSHSHIGAMFCDVTSFFLQNSSICLNRMPEGPELHLASLYVNTTCTGVVF
TGPVTKSEVSKNLHVPFTCEAYRISATSRGKEVKLTLTPMKSDDSKNKVKPGQADQPMEI
VFRFGMSGSFRFTTEDELPKHSHLRFHSKEKPCRVLSFVDARRFGSWQPNGTWQPDRGPC
VMFEYESFREKIVSHLSNRAFDRPICEALLNQKYFNGIGNYLRAEILFRLSIPPFVPARA
VLEGLKSEDAFENKKVVKNEITDTKTSDGSKEEQVKGEPGDLLRLCHTVPLEVVNLGGKG
YDPQKADYSDFRAWLRCYFVDGMQSIQDHNGRTMWFKGDPGPMTPTAPKAKKRVKKEDDH
DYTEKKKAVRSRSVSTPKKKNAIKRETVTKTPKKEEDGPSKETASKRKRGVNAPQQEKRE
TARRKKNSSSEPTTGPQRRSERETRQNSTPK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcatgtcctcaatgtccgttaaacgtagccacagccacattggtgctatgttt
tgtgatgtcacttcattttttttgcagaacagctcaatttgtttgaacagaatgccagag
ggaccagagctccacctggccagcctgtacgtgaacacaacgtgcacaggagtggtgttc
actggaccagtcacaaaatctgaggtcagcaagaatcttcatgtgcccttcacctgtgag
gcctatcgcattagcgccacttccagagggaaggaagtgaagctcacgctgacgcccatg
aagagtgatgattcaaaaaacaaagtgaagccaggacaagcagaccagcccatggagata
gtttttcgctttgggatgtcgggcagtttccgcttcaccacagaggatgagctgcccaaa
cattcccatctgcgttttcactccaaagagaagccctgcagagtgctcagctttgtggat
gcccgcaggtttggcagctggcaacccaatgggacgtggcagcctgaccgagggccttgt
gtcatgtttgagtacgaaagcttcagggagaagatagtgtcacacctgtccaaccgggcc
tttgacaggcccatctgtgaagcgctgctcaatcagaagtacttcaacgggatcgggaac
tacctcagggctgaaatccttttcaggctgagcatcccaccgtttgtgccagccagggcc
gtattagaaggcctgaagtcagaagatgcatttgaaaacaagaaggttgtgaagaatgag
atcacagacacaaagacctcagacgggtctaaagaggaacaagtgaaaggcgagccgggt
gacctgctccgactgtgtcacacagtaccgctagaggtggtgaacctaggtgggaagggc
tacgatccccagaaggcagactactctgacttcagggcgtggctgcggtgttactttgtg
gatggaatgcaatcgatacaggaccacaatggcagaaccatgtggttcaaaggagatccc
ggacccatgacacctacagcacccaaggccaaaaagagagtgaagaaagaagatgaccac
gattacactgaaaagaaaaaggcggttaggagtcgctctgttagcacaccaaagaagaag
aatgcgatcaaaagagaaactgtgaccaaaacaccaaagaaagaagaggatggaccttca
aaggaaaccgcgtccaagaggaaacgaggagtaaacgcacctcaacaggaaaagagagaa
actgcacggaggaagaaaaacagcagttcagagccaacgacaggtccacagaggcgtagc
gagagagagaccaggcagaacagtacacccaaataa
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