Pseudoliparis swirei (Mariana hadal snailfish): 130195415
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Entry
130195415 CDS
T09868
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130195415 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130195415 (ddx11)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130195415 (ddx11)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
130195415 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
130195415
NCBI-ProteinID:
XP_056272905
LinkDB
All DBs
Position
6:complement(14495586..14504285)
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AA seq
946 aa
AA seq
DB search
MSAGGFTNMENGRAQFPFPYQPYDIQEQFMQALYKTLDQGKVGIFESPTGTGKSLSLICG
ALSWLTDHEEKSRQKTAALLHEGEASLSTSSAPSSSAEPDWITDFVHKKAERDLVSKLKE
EELKRKTREEKLEMIRNNVQLKYAMKRKSCEEEEAFKLLHLSKEEETEAQGDQEDEELVI
AEYESDDESKTRSRFRGAEDDTDDELVEEHVNKIYYCSRTHSQLAQFVHEVQKSPFSKNI
SLVTLGSRQNLCINEEVLRLGSIQRINDRCVEMQKNKHAKPHHEEGAKRKRGPAKAVCPY
HKAPALQQMRDSVLGTVHDIEQMLKLGRETHACPYYATRLAVPSAQLVVLPYQMLLHEAT
RRAAGVQLKGQVVIIDEAHNLSDTLSSIHSAEITGAQLCRAHSQLTQYADRYKSRLKAKN
LMYIKQILFVIEGLVRVLGGKVGQNPQSQMTQTETELHTINNFLFKAQIDNINLFKLQRY
FEKSMISRKLVGFVEKYAGSGVSLHTPSSSNKENRRTEGLTRYLQTLQSTQVNAPVSSAG
QQGSEAEKVLSTSPMMQVEVFFMALTNSNTDGRVLVHRQGTLSEGSVKFLLLNPAVHFAE
VLKQCRAVIIAGGTMQPFSDFKQELLFSAGVGEERITEFSCGHVIPPENILPLVLCSGPS
GQELDYTFQNRDSPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRRIVSHWEASGALTR
LANKKKIFQEPKKANQVEQVLSEFSRCIQRCAVDAGGLTGALLFCVVGGKMSEGINFSDD
LGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHSGGRSPGQALIENLCMKAVNQSIGNDA
ITFTIITDSIVGKIVRSVFICIGLNLPKGRAIRHRGDYSAIVMCDRRYARPATLSKLPTW
IKSRTSTHTTFGTAFAALRKVRNKSAHESTHNKLLSCSKNIFICCL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggggggttcacgaacatggagaatggcagggcccagtttccatttccctac
cagccctatgacatccaggagcagttcatgcaggcactgtacaagacacttgaccagggc
aaagtgggaatctttgaaagtccgactggaacgggcaagtctctgagtctaatatgtgga
gcgctgagctggctcacagaccatgaggagaagagcaggcagaagacagctgctctgctg
catgaaggagaagcatctctctccacgtcctctgccccgagctcctcagcagagccggac
tggatcactgattttgttcacaagaaggcagaacgtgacttggtgtcaaagttgaaggaa
gaagaattgaaaagaaagacgagagaagaaaaattagaaatgatcagaaacaatgttcaa
cttaagtatgcaatgaaaagaaaaagctgtgaagaggaagaagcattcaaattgctccac
ctcagcaaagaggaagagaccgaggcacaaggcgatcaagaagacgaggagcttgtcatt
gcagaatatgagagtgacgatgagtcaaagaccaggagcaggtttcgtggggctgaggat
gacactgacgacgagctggttgaagaacatgtaaataagatttactactgcagtcgcaca
cactcccagttggcccaatttgtccatgaggttcaaaagagccccttcagcaagaacatc
agtctggtcacactgggctcacggcagaatctgtgtatcaacgaagaggtgcttcgcctg
ggcagcatccagcgcattaacgaccgctgcgtggagatgcagaagaacaaacatgcgaag
ccacatcatgaagaaggtgctaaacgcaagcgaggcccagcaaaggccgtgtgtccctat
cataaagcgccagcactgcagcagatgagggacagcgttctggggacagtccacgatatt
gagcagatgctgaagctgggaagggaaacacatgcatgtccatactacgccactcgcctc
gctgttccctctgcacagttggtggtgttgccctatcagatgttgctgcatgaggccaca
aggagggcagcaggggtccagctaaagggacaggtggtgatcatagatgaagctcacaat
cttagtgacacactctccagtatacacagcgcagagatcactggagcacagctttgccgt
gcccactcacagctcacccagtatgcagaccgctataagagcagactgaaggcaaagaac
ctgatgtacatcaaacagattctgtttgtgattgaagggcttgtccgggtgctgggaggt
aaagtggggcagaatccacagagtcagatgacacaaacagaaaccgaactgcacaccatc
aacaacttcctctttaaggctcagatcgacaatatcaacttgtttaagttacagagatac
tttgagaagagcatgattagcagaaaactggtgggctttgtggagaagtacgcaggatca
ggtgtgagtctgcacactccgagcagctctaacaaggagaaccggcgcacagagggccta
acccgataccttcaaacactgcagagcacccaggtcaatgcgccagtttcctcagcgggc
cagcaggggtcagaagcagagaaagttctgtctacgtctcccatgatgcaagtggaggtt
ttcttcatggctctcaccaacagcaacacggatggcagagtattggtgcacagacaaggt
actctgtcagagggcagtgtcaagttcctgctgttgaacccagcggtccacttcgccgag
gtgctgaagcagtgcagagcagttatcatcgcaggaggaaccatgcagcctttttcagac
ttcaaacaagagctgttgttttctgccggagtgggagaggagcgcatcactgagttctcc
tgtggtcatgtaattcctcccgagaacattcttcccctcgtcctgtgcagcggtccctcc
ggtcaggagctggattatactttccaaaacagagactctccacgcatgatggacgagacg
gggcgcattctctccaacatctgtaacgtggtcccgggcggggtcgtgtgcttcttccct
tcttacgagtactcgaggcgcatcgtttctcactgggaggccagcggtgctctgacccgt
ctggctaataagaagaagatcttccaggagccaaagaaagccaaccaggtggagcaggtg
ctgagtgagttctcccgctgtatccagaggtgtgctgtggacgctggcgggctcacagga
gcgttgctgttctgtgtcgtcggaggaaagatgagcgagggcatcaatttttccgatgac
cttggcaggtgtgtagtgatggtgggaatgccatatcccaacatcaaatccccagagctg
caggaaaagatgtcctacctcgataaacacctgcctcacagtggagggaggagccctggc
caagcccttatagaaaacctctgcatgaaggctgtcaatcaatccatcggtaacgatgca
ataacatttacaataattaccgattccatagttggtaagatagtacgatcggtattcata
tgtattggacttaatctgcccaaaggaagagctatccgtcaccgtggcgactattccgcc
attgtgatgtgtgaccgacgctacgctcgacccgcgaccctctccaaactaccaacgtgg
ataaaaagccgcaccagcacacacacaacttttggcactgcttttgctgccttacggaag
gtgagaaacaaatccgctcatgaatccacacacaacaaactcctgagttgttccaaaaat
atattcatatgttgtctgtaa
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