Pseudoliparis swirei (Mariana hadal snailfish): 130195432
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Entry
130195432 CDS
T09868
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03020
RNA polymerase
pswi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130195432 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130195432 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130195432 (polr3b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130195432 (polr3b)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130195432 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
LysM14_C
Motif
Other DBs
NCBI-GeneID:
130195432
NCBI-ProteinID:
XP_056272932
LinkDB
All DBs
Position
6:complement(16532145..16555496)
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AA seq
1132 aa
AA seq
DB search
MEIFGGEFCDLTPQELAAPVNTIVDKWKLLPAFLKVKGLVKQHIDSFNYFINIEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTAMEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGANKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDVVKHMRQDQITNGMVNAIAT
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDNYKLINTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKR
GQPMVKNKHIEDLSQGYRAFEDFLHEGLVEYLDVNEENDCHIALYEHMISKGTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTYDKVMGPMLDAATRKPIWRHNILDADGICSPGEKVENKQVLVNKSMPTVTQAPLE
GSTQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRFGYNYQGKDYVTSGITGESLEAYIYFGPVYYQKLKHMVVDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYND
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagatatttggaggggagttttgtgacctgactccccaggagctggcggctcctgtc
aacacgatagtggataaatggaaactcttaccagcctttctaaaggtgaaaggactggtg
aagcagcacatcgactcatttaactattttatcaacattgagataaagaaaataatgaaa
gccaacgagaagatcacaagtgatgctgatccaatgtggtacctcaaatacctcaatatc
tacgttggcatgcctgatgttgaagaaagcttcaacgtaaccagaccagtatctcctcat
gaatgtcgtctcagagacatgacctactcggcccccatcacagtggacatagagtacact
cgtggcagccagagaatcatccgcaatgcactgcccatcggaaggatgccaatcatgctg
cgaagctcaaactgtgttctcacaggaaagacggccatggaggtttctaaactcaatgaa
tgtcctctggatccagggggttatttcattgtaaaaggtcaagagaaagtcattctgatc
caggaacagctgtcaaagaatcgaatcattgtggagcaggacaggaagggtgccgtcgga
gcctcagttaccagctccactcatgagaagaaaagcagaactaatatgattgtcaaacaa
ggcagattctacctgaaacacaacacgctgtcagaggacgcccccattgccatcattttc
aagggtatgggcgtagagagtgaccaggagatcgtgcagatgatcggtacggaggagcat
gtcatggccagctttgccccgagtctggaggagtgtcagaaggcccagatcttcactcag
actcaggctctcaggtacctggggaataaagtgcggagacagcgcatgtggggaggcccc
aagaagaccaagatggaggaggccagagagcttttggcgtctcttatcctcacacatgtg
cccgtcaaagagtttaactttcgggcaaagtgtatttacctggctgtgatggttcggagg
gtgatactggctcaaggggccaacaaagtggacgacagagattactatggcaacaaacgc
ctcgagttggctggacagctcctgtctctgctgtttgaggatctgtttaagaagttcaat
tctgagctgaagaaaatctctgaccagatcatccccaagcagagagctgctcagtttgat
gtggtgaagcacatgcggcaggatcagatcaccaacggcatggtcaacgccattgccact
ggtaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtcttgtct
cgtctctcttttatctcggccctcggtatgatgacgaggatctcctcccagtttgagaag
accaggaaggtcagcgggccgcgctccctgcagccgtcccagtggggcatgttgtgtccg
tctgacacacctgagggagaggcctgtggtctggtgaagaacttggctctgatgacccac
atcaccaccgacatggaggacggtccaatcatcaaactggccttcaacctgggagtagaa
gacgtcaacctgttgtgtggagaggaactctcctacccaagcgtcttcctcgtcttcctc
aatggcaacattctcggtgtgattcgagataactacaagctgatcaacaccttcagactg
atgcgcagggcgggttttatcaacgagtttgtctccatctccaccaacttgaccgaccgc
tgcgtctacatctcttctgatggaggacgtctctgcaggccgtacatcatagtgaagagg
gggcagcccatggtgaaaaacaaacacattgaagacctgtcacagggctacagagccttt
gaagactttctgcacgagggcctggtggagtacctggatgtcaatgaggagaatgactgt
cacatcgccctttatgaacacatgatctcaaaaggcacaacacacttggagatcgagccc
ttcacgttgctcggggtgtgtgccggcctcattccctacccgcaccacaaccagtcaccc
aggaacacatatcagtgtgctatgggcaagcaggccatgggtactattggctacaaccag
aggaaccgcatcgacacgctgatgtacctgctggcgtaccctcagaagcccatggtcaaa
accagaaccatcgagctgatcgactttgagaagctgcctgctggtcagaacgccactgtg
gccgtgatgagctacagcggctacgacattgaggacgctctgatcctcaacaaagcctcg
ctagacagaggatttggcaggtgcctcgtctataaaaacgcaaagtgcacgttgcggcgt
tacaccaaccagacctacgacaaggtgatggggcccatgctggatgctgccacacgcaag
ccaatctggaggcacaacatcctggatgctgatggcatctgctcccccggtgagaaagtg
gagaacaagcaggtgttggtgaacaagtccatgccaaccgtcacccaggcaccactggag
ggcagtacccagccaggccagccccagtacagagacgtgcccatcagctacaagggctca
accgactcgtacatcgagaaggtcatgatctcatccaatgccgaagatgctttcctcatc
aagatcctcctcaggcagaccaggaggccagagataggagacaaattcagcagtcgacat
ggacagaaaggtgtttgtggcctcatcgttccacaggaggatatgccgttctgtgacacg
ggcatctgtccagatatcatcatgaaccctcacgggtatccctccagaatgacggtggga
aagttgattgagctgctggctgggaaagccggagtcctggacggccggtttcactacggt
acggcgttcggaggcagcaaggtgaaggacgtgtgtgaggatctcatccgctttggatac
aactaccagggcaaagactacgtcacctcaggaatcactggggaatctctggaggcgtac
atctacttcggaccggtgtattaccagaaactgaaacacatggtggttgacaaaatgcac
gccagagcccgaggccccagagccgttctcaccaggcagccgacggagggccgctccaga
gacggaggtctgcgtctgggcgagatggaacgtgactgtctgattggctacggagcgagt
atgttgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggg
caatgcggcctgttgggatactccgggtggtgtcactactgcaagtcttcgtgccacgtg
tcctccctgcgtatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatcccccgactcaaactgtcacgctacaatgactga
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integrated database retrieval system
