KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130195444
Entry
130195444         CDS       T09868                                 
Symbol
rpgrip1l
Name
(RefSeq) protein fantom isoform X1
  KO
K16550  protein fantom
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130195444 (rpgrip1l)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pswi03037]
    130195444 (rpgrip1l)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130195444 (rpgrip1l)
Cilium and associated proteins [BR:pswi03037]
 Primary cilia and associated proteins
  MKS complex
   130195444 (rpgrip1l)
SSDB
Motif
Pfam: C2-C2_1 RPGR1_C C2
Other DBs
NCBI-GeneID: 130195444
NCBI-ProteinID: XP_056272947
LinkDB
Position
6:complement(3390498..3416206)
AA seq 1324 aa
MFSGLDETAADVPVRDLPSRLAEDPSANQNARARQDVSRVSREVLEDRFLRVHEETLVLK
QHVHKQEDKIKKLGTKLMRLVKDRGRMEQLALGGGGGGGGPVVLRQRDVEMEELMEELQE
KVRSLQAEKEGVKRRLLVAKQQQVNSHSRRPAPYGRVPSRVNSGLKSYSPLPQAPPKSRS
WVLGPDHVSEPELVLSPAGSEGGRRPPTGLLPRFGHSLLEEARAEVRNLEKVLELQRSHL
EEVQAAAEELSEELRRKENQHQERLLQVREQQTSRLRTHVSSNVEMIRLQKQMFQRTERT
AELEGRFLGLQESQRALKVAHEAAMLKVDQLSAQLKEERLRSLDQEERLQSASISRLKVE
QLQERISEVEQERDLLKDDNDRLVHRAFDGSQEQRAQIQEQKLKLQIAQLEAALKADLVD
KNEILDKIKAERDANEKLAEENRKLHLQTVEQKQQLEELQGRLKSCSREELHEAELTEAL
LLIKKRQSQRSGDLCFLQEVEEGGGGRGGSELQAAHAETIQELQKTRNLLSMEARISRDY
QAELQAVLKKMEADKVTWEQQLERQATLLDSRAAKVQRLEAQLRDLAYGTKPSRSHPAVS
DEDECPEEGVVLGAEENLVELQVVGATLSPCALQALGGGEPSTFCTYAFYLFEPHATPVA
TGRTPAYGFTSRYVVAEDRRLLDFLRSGAVTVEMHEARGLDWRTLARGRLRLQPLLHDGR
VSGTVPLVGVSEDTRSFGSVDYWLRLKLPLKETLHLNQHRVPPARGFDSALLLPQPPSGW
NQLSITVHLCRDLKKSAGSGPPSPYVVYKFYDFPDYPTATVPDCCDPALDDLRSYSVRPD
ADLDRYLRAEALRLYVFDEKEQQMDSYLGKTRVPLLPLTRDQRITGAFQLTDPSGLAAGL
IEVTLQWRSTYAPPPAAIVAAEEAQREEEEEEEEEALQEEDKPPEASGSKVGGPGETRRA
LDRRRAAELPELRPRTRPGDQAAKKVSFMDPTAPGDQEDQEDQEDQEDQEDQEDQEDQED
QGDQGDQEDQEDQVSAPQVEDDESAGQRETSAPVVKGAAEEEEEEEEESHFSEGQLVPVG
SQSHSDDSEVSEDIMEDPDVEASQSDSDDCIVQERPAGRKPSQCVRVEVVSLSLRPGSRV
SLDGSVQRLFVEYQLLDLPTEETPLALPKPAGGHRATYNHSKVVPVDLENHGPRRQLLRR
VLQGRNPPMERWAGLRQEDRIRFTVVSEPPEAEEQERECEDVGVAYIRIPEILERRQDLT
ETSLEVVDVEDSRQVVGSLIVSVEGLEAMQAIMEEQDQEQDQDQDQEQHRDQERTLVSSL
LPSA
NT seq 3975 nt   +upstreamnt  +downstreamnt
atgttcagcggtctggatgagacggcggcagatgtcccggtcagagacctcccgtcccgg
ctggcagaagatccgtcggccaatcagaatgctcgtgctcggcaggacgtgtcgcgggtg
tcccgggaggtgctggaggaccggttcctcagagtccacgaggagacgctggtgctcaag
cagcatgttcacaagcaggaggacaagatcaagaaactgggcacgaagctgatgaggctg
gtgaaggaccgtggtcgtatggagcagctggccctgggaggaggaggaggaggaggaggc
ccggtggtcctccggcagcgtgacgtggagatggaggagctgatggaggagctgcaggag
aaggtccgcagcctgcaagccgagaaggagggcgtgaagcggcgcctcctggtggccaag
cagcagcaggtcaactcccacagcaggaggccggcgccctacggccgcgtcccgtcacgg
gtcaactcggggttaaagagctactccccgcttcctcaggcgccccccaagagtaggtcc
tgggtcctgggtccagatcacgtgtcggaacctgaactggttttgtctcctgcaggttca
gagggaggaagaagaccccctacgggcctcctgcctcggttcggacacagcctcctggag
gaggcccgggccgaggtccgcaacctagagaaagtgctggagctccagaggagccacttg
gaggaggtgcaggccgcggcggaggagctgagtgaggagctgaggaggaaggagaaccag
caccaggagagactcctgcaggtccgagagcagcagacctccagactcaggacgcacgtc
agcagcaacgtggagatgatccgcctgcagaagcagatgttccagaggacggagaggacg
gcggagctggaggggcgcttcctgggcctgcaggagagccagagggcgctgaaggtggct
cacgaggcagcgatgctgaaggtggaccagctgtcggctcagctgaaggaggagaggctg
aggagtctggaccaggaggagcgtctgcagagcgcctccatctccaggctgaaggtggag
cagctgcaggagaggatcagcgaggtggagcaggagagagacctgctgaaggacgacaat
gacagactggtccacagagccttcgacgggtcccaggagcagagggctcagatccaggag
cagaagctgaagctgcagatcgctcagctggaggcggcactgaaggccgacctggtggac
aagaacgagatcctggacaagatcaaagcggagcgagacgccaacgagaagctggcggag
gaaaacaggaaacttcatctacagactgtggagcagaagcagcagctggaggagctccag
ggccgcctgaagtcctgcagcagagaggagctccacgaagccgagctcaccgaggctctg
ctgctcattaagaagcgtcagtcccagaggagtggagatctgtgcttcctgcaggaggtt
gaggagggaggaggaggaagaggcgggtcagagctccaagctgctcacgctgagaccatc
caggagctgcagaagaccaggaacctgctcagcatggaggccaggatcagcagagactac
caggcggagcttcaggcggtgctgaagaagatggaggccgacaaagtgacgtgggagcag
cagctggagcgacaggcgacgctgctggactccagagccgccaaggtccagagactggag
gctcagctccgagacctggcctacggcaccaaaccctctcggtcccaccccgcggtgagc
gatgaagacgagtgtccggaggaaggtgttgtcctgggcgcggaggagaacctggtggag
ctgcaggtggtgggggccacgctgtccccgtgcgccctgcaggccctggggggcggcgag
ccctccaccttctgcacctacgccttctacctgttcgagccgcacgccacgccggtggcc
acgggccgcacgccggcctacggcttcacgtcccgctacgtggtggcggaggaccgccgg
ctgctggacttcctgcgctccggcgccgtcaccgtggagatgcacgaggcccgcgggctg
gactggaggacgctggccagagggcggctccggctgcagccgctgctgcacgacggcagg
gtgagcggcaccgtgccgctggtcggcgtctccgaggacactcgctccttcggctcggtg
gactactggctgaggctgaagctcccgctgaaggagacgctccatctgaaccagcaccgg
gtaccaccagcccgcgggtttgattccgcgctcctcctcccgcagcctccgtccggctgg
aaccagctctccatcaccgtccacctctgcagagacctgaagaagtccgccggctccggg
ccgccgagcccgtacgtggtctacaagttctacgacttccccgactacccgaccgccacc
gtcccggactgctgcgacccggcgctggacgacctccggtcctactccgtccgcccggac
gcggacctggaccgctacctgagggccgaggccctgcggctctacgtgttcgacgaaaag
gagcagcagatggactcgtacctggggaagacccgagtgcccctgctgccgctgaccagg
gaccagaggatcaccggagcgttccagctgaccgacccctcgggactcgccgccggcctc
atcgaagtgacgctgcagtggaggtccacctacgcccctccgccggccgccatcgtggcc
gccgaggaggcgcagagggaggaggaggaggaggaggaggaagaggcactgcaggaggaa
gacaaaccccccgaggccagcgggtcaaaggtcggcggaccgggcgaaactcgtcgcgct
ctcgaccgtcgaagagctgccgagctgccggaactcagaccgaggactcgaccgggggac
caggccgccaaaaaggtctcgttcatggacccgacagcgccgggggaccaggaggaccag
gaggaccaggaggaccaggaggaccaggaggaccaggaggaccaggaggaccaggaggac
cagggggaccagggggaccaggaggaccaggaggaccaggtttctgctcctcaggtggag
gacgacgagtctgcaggccagagagagacttcagctcctgttgtgaagggcgctgcagag
gaggaggaggaggaggaggaggagtctcacttctctgaagggcagctggtcccggtcggc
tctcagtctcattctgacgactccgaggtctctgaggacatcatggaagatccagatgtg
gaggcctctcagtccgacagcgacgactgcatcgttcaggagcgcccggcggggaggaaa
ccctcccagtgcgtccgggtggaggtggtgtctctgagcctgcggccgggctcccgcgtg
tcgctggacggcagcgtgcagcgtctgttcgtggagtaccagctgctggacctccccacg
gaggagacgccgctggccctgcccaagccggccgggggccacagggccacctacaaccac
agcaaagtggttcctgtggacctggagaaccacgggccgaggaggcagctgctgagacga
gtcctgcagggccggaacccccccatggagaggtgggcgggacttagacaggaagacaga
atccggttcacggtggtgagcgagcctccggaggcggaggagcaggagagggagtgtgag
gatgtgggcgtggcttatatcaggatccccgagatcctggagagacgacaagacctgact
gagaccagcctggaggtggtggacgtggaggacagccgtcaggtggtcggcagtctgatt
gtgtctgtggagggactggaggctatgcaggccatcatggaggagcaggaccaggagcag
gaccaggaccaggaccaggagcagcaccgggaccaggagagaaccctggtctcctctctg
cttccatcagcatga

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