Pseudoliparis swirei (Mariana hadal snailfish): 130195508
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Entry
130195508 CDS
T09868
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04115
p53 signaling pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04137
Mitophagy - animal
pswi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130195508 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130195508 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130195508 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
130195508 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130195508 (siah1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130195508 (siah1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130195508 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
130195508
NCBI-ProteinID:
XP_056273062
LinkDB
All DBs
Position
6:complement(22654395..22671041)
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AA seq
386 aa
AA seq
DB search
MLPKWGNGREKCDPLPCGVFWAAVRFPWKRQKKYGDEGPREGSTPTSVGQVKSKPASVAL
QAPPWNSWSGLFPCVATRSVRRAEEVTTFQEKTKALFGNLMDEEMSRQTATALPTGTSKC
PPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCR
GPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEELCEFRPYSCPCPGASCK
WQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQ
EKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDC
LVFDTSIAQLFAENGNLGINVTISMC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccaaatgggggaacgggagggagaaatgtgaccccctgccttgtggtgtgttc
tgggcagcggtgcggtttccatggaaaaggcagaagaaatatggcgacgagggtccgcgt
gagggctccacccccacgtctgtgggccaggtgaaatccaagccggctagcgtagcactg
caagcgccgccctggaactcctggtccggactcttcccgtgcgtcgccaccaggagcgtg
cgcagggctgaagaggtcaccacatttcaagagaagacaaaagccttatttggaaatctt
atggacgaagaaatgagtcgccagactgccaccgcgctgcccacaggaacctccaagtgc
cccccctcccagcgcgtgcccaccctgtcgggcaccaccgcctccaacagtgacctggcc
agtctgttcgagtgccccgtctgcttcgactatgtcctcccccccatcctgcagtgccag
tccgggcacctggtgtgctccaactgccggcccaagctcacctgctgccccacctgccga
gggcccctgggctccatcaggaacctcgccatggagaaggtggccaactcggtcctcttc
ccctgcaagtacgcctcctcgggctgcgaggtcacgctgccccacaccgacaagacggag
cacgaggagctgtgcgagttccggccgtactcgtgcccgtgccccggcgcctcctgcaag
tggcagggctccctggacgccgtcatgccccacctgatgcaccagcacaagtccatcacc
acgctgcagggggaggacatcgtgttcctggccacggacatcaacctgccgggcgccgtg
gactgggtgatgatgcagtcgtgcttcggcttccacttcatgctggtcttggagaagcag
gagaagtacgacggccaccagcagttctttgccatcgtgcagctcatcgggacccgcaag
caggccgagaactttgcctaccggctggagctcaacgggcaccggcgccgcctcacctgg
gaggccacgccgcgctccatccacgagggcatcgccaccgccatcatgaacagcgactgc
ctggtgttcgacacgtccatcgcacagctgtttgcggagaacggcaacctgggcatcaac
gtgaccatctccatgtgctag
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integrated database retrieval system
