Pseudoliparis swirei (Mariana hadal snailfish): 130195541
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Entry
130195541 CDS
T09868
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130195541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130195541
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130195541
BRITE hierarchy
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
130195541
NCBI-ProteinID:
XP_056273103
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Position
6:complement(14299127..14311261)
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AA seq
545 aa
AA seq
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MAVNVPGLVAVVVFYIVILAIGIWASRKSKKVEKTCTGAKSEVAIVGGRNINVLVGVFTM
TATWVGGGYIMGTAEVVYSPSQGLIWAMGPPAYAITFLLGGLFFAKPMRSKRYVTMLDPF
QHRYGNMLTAALLLPALVSDMLWVACILAALGGTMSIILGLSSTISIIISAAVSIIYTLL
GGLYSVAYTDIIQLSFVFVSLWLCIPFLILSPAVTNISHTVHLNQTLGISWLGELKLEDA
GKWADEMLLLALGGLAYQALYQRILSAASSTQAQVTCFAAAGAAFIMGIPSVIIGVVAAS
ADWNQTAYGLPPPFERGEAGNILPLALHYLTPSWLSVLGIGCVAAAVMSSMDSALLSSAS
MFTQNIYKTTLRKKASERELQIVIRIIVLLVGLAGLGLAFGDDSVFALWMVSGDLLYCVV
LPQLVCVLYFSRANSYGAICGYLVGLLVRGLSGEPLLGIPALILYPGWREVDGVKVQYFP
FRTIAMLSSMICIISVSWLVEVAFRRQIIPQSWDSLGVFDEKKEAEKEQVPAPCEENNSS
LNTKL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaatgtccccggactcgtggccgtggtggttttctatattgtcatccttgca
attgggatctgggcatctcgaaaatccaagaaagtggagaagacatgtaccggcgctaag
agcgaagttgccattgttggtggccgcaacattaatgtcctggtcggggttttcaccatg
acagcaacatgggtcggaggaggttacatcatgggaactgctgaggttgtttattcccct
tctcaaggtctcatctgggccatggggcctcctgcctatgctatcacttttcttttggga
ggattgttttttgccaaaccgatgaggtcaaagcgctacgtgaccatgttggatcccttc
cagcatcgctatggcaacatgctcactgcagcattgctgcttcctgctttggtcagtgat
atgttgtgggttgcctgcatccttgctgctctgggaggaacaatgagcatcattcttggg
ctgtcatctaccatctccatcatcatctcggcagctgtctccatcatctacacattgtta
ggtggtctctactcagtggcatatacagatatcatccagctttccttcgtctttgtcagc
ctgtggctctgcattccttttttgatactcagtcctgcagttactaacatctcgcacaca
gtccacctcaaccaaacacttggaatctcatggttgggagagttgaagctggaggatgca
ggaaaatgggcagatgagatgctgttattggctttagggggactggcctatcaagctctc
taccagaggatcctctctgcagcctcctcgactcaggctcaggtcacctgctttgctgct
gctggggcagctttcattatgggaatcccctcagttatcattggagtagtggctgcctct
gcagactggaaccagacagcgtacggtctcccccctccttttgaacgaggggaggcaggg
aatatcctcccactggccctgcactacctcacaccctcctggttgtcagtgttgggcatt
ggttgtgtggcggcggcagttatgtcctccatggactctgcgctgctgtcctcagcatcc
atgtttacacaaaacatatacaagacaactttgaggaagaaggcctcggagcgagagctg
cagatagtgatccgtattatcgtgctgctggtgggcctggctggattaggcctggccttt
ggcgatgacagcgtgttcgccctctggatggtaagcggggacctgctctactgcgtggtc
ctcccgcagctcgtatgcgtgctgtacttcagccgtgctaatagctacggtgctatctgt
ggctatttagtaggactgctggtgcgtgggctgagcggggagccgctgcttggaatcccc
gctctcatcctgtaccccggctggcgggaggtggacggagttaaagtgcagtacttcccc
ttcaggacaattgccatgctctcctctatgatatgtattatttcagtgtcctggctggtg
gaggtcgccttccgtcgccaaataattcctcaatcctgggattcactgggggtgtttgat
gagaaaaaagaggcagagaaggagcaagtgcctgctccttgtgaggaaaataactctagc
cttaatacaaaactctag
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