Pseudoliparis swirei (Mariana hadal snailfish): 130195589
Help
Entry
130195589 CDS
T09868
Symbol
si:dkey-82f1.1
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 2A
KO
K20161
DENN domain-containing protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195589 (si:dkey-82f1.1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130195589 (si:dkey-82f1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
Motif
Other DBs
NCBI-GeneID:
130195589
NCBI-ProteinID:
XP_056273178
LinkDB
All DBs
Position
6:complement(7792033..7828923)
Genome browser
AA seq
1054 aa
AA seq
DB search
MPAASTMTGGRALLLCTNSDNCIYQSVNGLQCCGLKVGVAPSSAAPHRQEVCGSPGDRDR
RDPAVSTKLSPGPPDTMLAHRRANSTSDPPTSNTENGLCGKPNNKSPAAAKTASIRDKIS
QWEGKKETAPPTPTGTCPLGTTQKDVEAVRKKDFKTSEVQWTDSKRLVSWDRRDSGKENV
GKLGDSRPKSPECLTDKDKEVILEKGFRASKPTEQPKDKKSVLTHVKKLEKATKEVPDRP
SLAFPGNYFCPPSKEELEETEKKANEPIFGTLDVVRSGGSRRRREGDPENVYSEPGAPSI
NPLPKPQRTFQHHTPPATPAPGPGSGKGRRNLPPLPSIPPPPLPKCXPPGVCRRPWADKP
QDSSNRKSYEFEDLLQSSTESCRVDWYAQSRLGLTRTLSEENVYEDIIDPPSKENPYEDI
ELEGSFVGSKCVSPASSSPVPDTPTKLSCKPGFFRQTSERRSFKLLELRKPGRDTGISSP
YRISPPSTPSSPDDTPCLSGDPYNRRRRKIPKVVLIINGIFEARRGKKRMKRVSQSTESS
SGRVTDENSESESDTEEKLKAHSQRLVSVQSMLRQTGRYRTLERDLMDLQERKLFEYFIV
VALHKTKAGVPYLPEVTQQFPLKLERSFKFMREAEDQLKVIPQFCFPDAKDWAPVDNFPS
ETFSFVLTGEDGSRRFGYCRRLLPSGKGRRLPEVYCIVSRLGCFDLFSKILDEVEKRRAI
SPALVQPFMRGIMEAPFPAPGRTITVKNFLPGSGTEVIELCRPSDSRLEHVDFECLFSSL
SLRLLLRVFASLLLERRVIFTADKLSTLSQCCHAVVALLYPFTWQHTYIPVLPPSMLDIV
CTPTPFIVGLLSSSLPRLKELPIEEVLVVDLGNSRFLRQLDDEDSILPHKLQAALEHVLD
KRKELASEKGDLPNDSSCLSTVVSEAFVRFFVEMVGHYSLFMGGAEREDESISSPTSPSP
SSSSSSSSPSASFQREAFRKAVTSKSLRRFLEVFMETQMFTSFIQERELRRQGLRGLFEV
RAQEYLDSLPGSEQRGVNKFLKGLGNKMKFLSKK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgctagcaccatgaccggtgggagggccctgctgctctgtacgaactctgac
aactgtatctaccaatcagtcaacgggctccagtgctgtggcttgaaggtcggagtggct
ccgtcgtctgcggcgccccatcgccaagaggtgtgcgggtccccgggggacagagacagg
agggaccccgctgtgtccaccaagctcagcccgggtcctcctgacaccatgctggctcac
aggagagccaactccaccagcgacccgccgacttctaacacggagaacggtctgtgcggc
aagccgaacaacaagagcccggcggccgcgaagacggccagcatccgcgataagatctca
caatgggagggtaaaaaagagacggccccgccgactcccacggggacatgtccgctgggc
acgacgcagaaggacgtcgaggcggtgaggaaaaaggatttcaaaacttcggaggtccaa
tggacggatagcaagaggctggtcagctgggacagacgggactcggggaaggagaatgtg
gggaagttgggggattcgaggcccaaatcgccggagtgcctaacagacaaggacaaggaa
gttattctcgagaaaggatttcgggcttcgaagccaacagaacaaccaaaggacaagaaa
agtgttttaactcatgttaagaaactggagaaggcaacaaaggaggttcctgacagaccg
tcactggcatttccagggaattacttctgccccccttcaaaggaggagctggaggaaacg
gagaagaaagccaacgagcccatttttgggactcttgacgtcgttcgttctggcgggtcg
cggaggaggagggagggggatccagagaacgtgtacagtgagccaggggctccgtctata
aaccctctacccaaacctcagagaaccttccagcatcacactccccccgcgaccccagct
ccagggcctggctcggggaaagggaggaggaacttgccccctctgccctccattcctcct
ccacctttacccaagtgcnccccacctggagtttgcaggagaccctgggcggacaaaccc
caggacagtagtaacaggaagtcttatgaatttgaggatctgctccagtcgtctacagaa
agctgcagggtggactggtacgctcagtccagactgggcctaacgcgcactttatcggaa
gagaatgtctacgaggatatcatagatcctccatccaaggagaacccctatgaagacata
gagctggagggaagtttcgtcggaagcaaatgtgtttcacctgcatcctcgtctcccgtc
cccgacacgccaacgaagctctcctgcaagcccggcttcttcagacagacttcagaacgg
cgaagcttcaagctcctggagctgcgtaagcccggcagggacactggcatctcctccccc
taccgaatcagccccccctccacacccagcagcccggacgacaccccctgcctctcggga
gacccgtacaatcgcaggaggaggaaaatccccaaggtggtgctgataatcaatggcatc
ttcgaggcccgacgagggaagaaacgaatgaagagggtgtctcagtccacagagtccagc
tcggggagagtgacggatgagaacagtgagtcggaaagtgacacggaggagaaattaaaa
gctcacagccagcgcctggtgtcggtccagtccatgctgaggcagacggggcggtaccgc
actttggagagggatctgatggacttgcaggagaggaaactctttgagtatttcatcgtt
gttgcgcttcataaaaccaaggccggagtcccatacctgccagaagtcacacagcaattc
cccctcaagcttgaaagaagctttaagttcatgcgggaggctgaggaccagctgaaggtc
atccctcagttctgtttccccgacgccaaagactgggctcccgtcgacaacttccccagt
gagacgttctcgtttgtcctgaccggtgaggacggaagccggcgcttcggttactgtcgc
cgattactgcccagtggtaaaggccggaggctccccgaggtctactgcatcgtcagccgc
ctgggctgcttcgatctcttctccaagatcctggatgaagtggaaaagaggagggctatc
tcccctgctctggtgcagccctttatgagaggcataatggaagctcccttccctgctcca
ggaaggaccatcactgtcaagaacttcctcccgggctctgggacagaggtgatagagctg
tgcaggccttcggactctcgtctggaacatgtggacttcgaatgtctcttttcctccttg
agtctccgcctccttctccgagtgttcgcctctctacttctggagcgccgagtcatcttc
accgccgacaaactcagcacgttgtctcagtgttgccatgccgtcgtggctctcctctac
cccttcacctggcagcacacctacatccccgtgctcccgccctccatgctggatatcgtc
tgcacccccacccccttcatcgtgggcctcctctccagctctctgcctcgactcaaagag
ctgcccatagaagaggtcctggtggtcgacctcggcaacagtcgcttcctacgacagctg
gatgatgaggactccattcttccccacaagctgcaggcagctctcgagcacgtgctggac
aagaggaaggagctggccagtgagaaaggagatctgcccaatgactccagctgcctcagc
acggtggtctcggaggcctttgtgcgtttcttcgtggagatggtgggccactactccctc
ttcatgggtggagcggagcgagaggatgagtccatctcctcgcccacctcgcccagcccc
tcttcgtcttcttcttcttcctccccctccgcgtcctttcagcgcgaagcctttcgcaaa
gcggtcacgtccaagagcctgaggcggttcctggaggtgttcatggagacccagatgttc
accagcttcatccaggagagggagctgcgcaggcagggcctccgaggtttgtttgaggtg
agagcacaagagtatctggactcgctgccggggagcgagcaacgaggagtcaacaagttc
ctcaagggtctcggaaacaagatgaaattcctttccaagaaatga
DBGET
integrated database retrieval system
