Pseudoliparis swirei (Mariana hadal snailfish): 130195604
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Entry
130195604 CDS
T09868
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130195604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130195604
04131 Membrane trafficking [BR:
pswi04131
]
130195604
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130195604
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130195604
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130195604
mRNA cycle factors
P-body specific factors
130195604
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Myosins
130195604
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130195604
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130195604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130195604
NCBI-ProteinID:
XP_056273205
LinkDB
All DBs
Position
6:10860019..10874733
Genome browser
AA seq
1823 aa
AA seq
DB search
MAASELYAKYARVWLPDAGEVWKSAELTKDYSPGDLKLTLQLEDGSEVEYKIDPGTNNLP
PLRNPNILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
AKVSCSSSEASVEERVLASNPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHRIIGANMR
TYLLEKSRVVFQTDEERNYHIFYQLCASSHLPEFKAFKLGCADDFHCTNQGQSPVIDGVD
DAAELCNTRSAFSKLGIKESDQMAIYQIMAAILHLSNVEVKDQSADKSSISPDNVHLMVF
CELMGVAYEEMAHWLCHRKLQTATETFVKPVSKMNAVNGRDALAKHIYARLFRWIVCSIN
NALKSAAKKHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFDDNQPCIDLIEAKLGVLDLLDEECKMPKGSDDTWAQKLYNTLLKQNAFFDK
PRMSNRAFIIHHFADKVEYECEGFLEKNRDTVNAEQMNVLKKSKVDWLLKLFEDDEKATS
SVKKRASVAGRTGPAQRDNKKTVGLQFRQSLHLLMDTLNATTPHYVRCIKPNDNKSPFFM
DPMRAVQQLRACGILETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLHDRKQTCKNLLE
KLVTDQDKYQFGKNKIFFRAGQVAYLEKLRSDMLRMACVRIQKTIRCWLARSKYLRMRAS
ALTIQRHVRGHQARCYVKFLRRTRAAVIIQRNVRMWAARTRYQQQRSAALTIQCFLRAYM
ARKQYYKLIFEQKALVIQKWFKGWQARKHYKRTMEAIVLLQSCVRRLKAKKELKKLKVEA
RSVERVKKLNIGMENKIMQLQHKINEQHKDNRELSERLNVTEKTQTTEREKQNREIENLR
RSEQEARVKAVKLPSLLEQLSFLQHELDNTRREKDDLEEHTKVYKEQTLQALEDLNIRNS
LLISQKDELSKQNLEQADQLTEIKTNVESANRLEKDLAEERSRYQSLLSEHLHLEERHRD
AKDEMNLSANQSSRKSGHKRTDSNYSSNSSEFSQSFCSSEGEDGSKQAEDETQATVDLSI
LLKLQRRVKELEQDKQSLWLQLDNREEAQEEKAKEVEEQITVGRAELDLETLKRQELESD
NKKLKQDLDELRKSLTNEESESAPPVPGSLTYSILLEHLGSSNDELEIRKEEVLLLRSHM
VRQEALKHKDSVLGKGVNLDLSEVPSYQDVDKSTNIYTLNEDGEMWLAYEGMKETNRILV
CQMQEQKRAGHVEYKKLLEEVNKFKAEKEQQQKLLAQSLLLPEDARIEASLKHEMTRLTN
ENLELMEQQEQQVQTVRKLTKELKLYIKKVEEFEASVHQKNKAPVMTAPVRAVNITRKEK
EYRGMLAYREGDETRLVKKLVVDLKPRGVAVSFIPGLPAYIIFMCVRYADNVNDDQRVST
LLNSTISSIKGVIKRRGSDFEVVSFWLANTCRLLHCLKQYSGDEAFVTHNTAKQNEHCLA
NFELSEYQQVYGDLAIQIYRQLVKCMEVTLQPLIVASMLEHEIIQGVLGSKPTGLRKRST
SFPDQAVTVEVLLQRLGGFLSTMSQHGMDLDLIKQLVKQQYYIICAVTLNHLLLRKDMCC
WSKGLQIRYNVWHLEEWLTERQMSDCGAKETLEPLVQAARLLQIKKNTEADAQVICTMCS
ALTTAQIVKVLTLYTPMIEFEERVSTTFITTIQNLLKDRVESTTLMMDTKKIFSVTLPFT
PSSVALEDIQIPASLNLGFLSRI
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaactttacgccaagtatgcccgtgtatggctgccagatgcaggagaa
gtgtggaagtcagcggagctcaccaaagattacagccccggcgacctgaagctgactctg
cagctggaggatggctcggaggtggaatacaaaatagaccccggaaccaacaacctccca
cctctaagaaaccctaacatcctggttggggaaaatgacctcacagctctcagctacttg
cacgagcctgcagtgctacacaacctcaaagtgcgctttatcgactccaagttgatttac
acatactgtgggattgtcttggtggccatcaacccttatgagagccttcccatctatgaa
gcggacatcatcaatgcctacagtggacagaacatgggagacatggacccccatatcttt
gcagtagcagaagaagcatacaaacagatggccagagatgaaagaaaccagtccatcatt
gtgagtggtgagtcgggagctggcaaaaccgtctcagctaagtatgctatgcgttacttt
gccaaagtcagctgctcctccagtgaggccagtgttgaggagagagtcctggcctccaac
cccatcatggaggctcttgggaatgccaagacaacgaggaatgacaacagcagtcgcttt
gggaagtacattgagattgggtttgacaagaagcatcgtatcatcggggctaacatgaga
acctacttactggaaaagtctagagttgtgtttcagaccgacgaagaaaggaactaccat
atattctaccagctgtgtgcctcttcacatttaccagagtttaaagccttcaagttaggt
tgcgcagatgacttccactgtactaaccagggtcagagcccagtcatagatggagtggat
gatgccgcagagctgtgcaataccaggagtgctttctcaaagttagggatcaaagaaagt
gatcaaatggcaatttaccaaattatggcagctattctccatcttagcaatgtggaggtg
aaagatcagtcagcagacaaaagcagcatctcgccggacaatgtccacctgatggtgttt
tgtgagttgatgggtgtagcctatgaagaaatggcccactggttatgtcacaggaaactc
cagacggccacagaaacctttgtcaagcctgtctccaaaatgaatgcggtcaatggccgg
gatgccctagccaagcacatctacgcccgactctttagatggatcgtgtgcagtatcaac
aatgccttgaagtctgcagcaaagaaacactccttcatcggtgtgctcgacatttacggg
tttgaaacatttgacgtcaacagctttgaacagttttgcatcaactatgccaacgagaag
cttcagcagcagttcaacctgcatgtcttcaaactggagcaggaggagtacatgaaagag
gagatcccgtggacattgattgactttgacgacaaccagccgtgcattgatctgattgag
gccaagctgggggttctggaccttctggatgaggagtgcaaaatgcccaaaggctctgat
gacacatgggcccagaaactgtacaacactctcctgaagcagaatgctttctttgataaa
cccaggatgtcaaatagagctttcatcatccaccactttgcagacaaggtggagtacgag
tgtgaaggtttcctggagaaaaaccgggacacagtcaatgcggagcagatgaatgtgctg
aaaaagagcaaggttgattggctgctgaagctgtttgaggacgatgagaaggcaacaagt
tctgtgaagaagcgagctagtgtcgctggaaggactggtccggcccagcgggataataag
aagactgttggacttcagttccgacagtctctacatctgctgatggacacgttaaatgct
acaactcctcactatgtacgctgcatcaagccaaatgacaacaaatctccattcttcatg
gatccgatgagggcagtgcagcagctgcgagcatgtggcatcctcgaaacaatccgaatc
tcagcagcaggcttcccatctagatggacctatcaggaattctttagtcgctaccgggtc
ctcatgaagcaaaaggatgtgcttcatgacagaaaacaaacctgcaaaaatctcctcgaa
aaacttgtaacggatcaggataagtatcagtttggcaaaaacaagatcttcttcagggcg
ggtcaggtagcttacctggagaagctgcgttctgacatgctgcgaatggcctgtgtccgc
atccagaagaccatccgctgctggctggcccgcagcaagtacctgaggatgagggcgtct
gctctcaccatccagagacatgtacgaggtcaccaggcacgctgctatgttaagtttctg
cgaagaaccagagcagctgttatcattcagcgcaatgtgcgcatgtgggcggccaggaca
cgctaccagcagcagcgctctgcagctctcaccattcagtgcttcttgagggcctacatg
gctagaaagcagtactacaagttgatatttgagcaaaaggctcttgtcatccagaagtgg
ttcaaaggctggcaggcgagaaagcattacaaacgcaccatggaagccatcgtcctgctg
cagagctgtgtgcgccgcttgaaggcaaagaaggaactaaagaagctgaaagtggaggct
cgctctgtggagcgtgtcaagaagctcaacattggcatggagaacaagattatgcagttg
cagcacaagataaatgaacagcataaagacaacagagagctcagtgaaaggctgaatgtt
acggagaagactcagactacggagagagagaaacagaacagagagattgaaaacctacgt
agatccgagcaggaggccagagtcaaggccgtgaagcttccctcgctgctggagcagctc
tccttccttcagcacgagctggacaacacccgcagagagaaagatgacctggaagagcac
accaaggtctacaaggagcagacgcttcaggcgctagaagaccttaatataaggaacagc
ttgctgatcagccagaaagatgaactgagcaaacaaaacctggaacaagcagatcagttg
acagaaatcaaaaccaacgttgagagtgcaaacaggctggagaaggacttagctgaagag
cgctctcgctaccaaagtctcctgagtgaacacctgcacctggaggagcggcacagagac
gcgaaggacgagatgaatctcagcgctaaccagagttcaagaaaatctggtcacaagagg
acggactccaactacagcagcaactcatctgagttcagtcagagcttctgctcctcggag
ggggaagacggctccaaacaagcagaggatgagacccaggcgacggtggacctgtcgatc
ctcctgaagctgcaaagacgagtgaaggaactggagcaggacaaacagtcgctctggctg
cagctggataacagagaagaagcccaagaagaaaaggcaaaagaggtggaggagcagata
actgttggccgagcagaactggacttggaaacactgaagcggcaagaactggagtctgac
aacaagaagctgaagcaggatctagatgagctgagaaagtctctgaccaatgaggagagt
gagtcggcgccccctgtccccggctcgctaacctacagcatcctgctggaacatctcggt
tcttccaacgatgaactggagatacgaaaagaggaagtgctgctcctccggtcccacatg
gtccgccaagaggctcttaaacataaggactcggtgctcgggaaaggtgtgaacttggat
ctaagtgaagttccttcatatcaagatgttgacaagtccactaacatctatacactcaat
gaagatggagagatgtggctggcttatgaaggcatgaaagagaccaatagaattttggtg
tgccagatgcaggagcagaaacgtgctggccacgtggagtataagaagctgcttgaggag
gtgaataagttcaaggctgaaaaggagcagcagcagaagctgctggcccagagcctcctc
ctgcctgaagacgcccgcattgaggcgagcctgaagcacgagatgacccggctcaccaac
gagaacctggaactcatggagcagcaagagcaacaagtccaaactgtacgcaagttgaca
aaagaactgaaactttacattaaaaaagtggaagaatttgaagcgagtgttcatcaaaag
aataaagcccccgtgatgactgctcccgtcagagcggtgaatatcacccgcaaggagaaa
gagtaccgaggcatgttggcgtacagggagggcgacgagacccgcctggttaagaaactg
gtcgtagatctgaagcctcgtggtgttgcagtcagcttcatccccgggcttccggcctac
atcatcttcatgtgcgtacgctatgcagacaacgtgaatgatgatcagagagtcagcact
ctgctcaattccaccatcagcagcatcaagggcgtcattaagaggagaggaagtgatttt
gaagtggtgtctttctggctggccaacacatgcagattactgcactgtctgaagcagtac
agtggagacgaggccttcgtaacgcacaacactgccaagcagaacgagcactgcctggcc
aacttcgaactgtctgagtaccagcaggtttacggtgatctagccatccaaatttaccgc
cagctcgtcaaatgcatggaggtcaccctgcagcccctgattgtggccagcatgctggag
cacgagataatccagggtgttttggggtccaaaccgaccggcctgaggaagaggagcacc
agtttccccgatcaggctgttacagtggaagtcctgctgcagcgtcttggcggcttcctc
agcaccatgagtcagcacgggatggacttggacctcattaaacagctagtcaagcagcag
tattacatcatctgcgcggtcacactcaaccacctgctgctgcggaaggacatgtgctgc
tggagtaaaggcctgcagatcaggtacaacgtgtggcacctggaggagtggctgacggag
aggcagatgtcagactgcggtgccaaggagactctggagcctctcgtacaggcggcacgg
cttctacagatcaagaagaacaccgaggcagacgcacaagttatttgcaccatgtgctcc
gccctcaccacagcacagattgtcaaagtgttgaccttgtacaccccaatgattgagttt
gaggagcgagtgtcgaccactttcatcacaactattcaaaaccttttgaaagacagagtt
gagtcgaccacattgatgatggacacgaagaagatcttttccgtcaccctccccttcaca
ccgtcctctgtggccctggaggacatccagatccccgccagcctcaatctgggcttcctc
tcccgcatctag
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integrated database retrieval system
