Pseudoliparis swirei (Mariana hadal snailfish): 130195607
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Entry
130195607 CDS
T09868
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130195607 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195607 (ap4e1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Others
AP-4 complex
130195607 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
Coatomer_b_Cpla
HEAT_EZ
MG491_central
Motif
Other DBs
NCBI-GeneID:
130195607
NCBI-ProteinID:
XP_056273210
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All DBs
Position
6:10891970..10902436
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AA seq
1148 aa
AA seq
DB search
MSDVVEKTLTALPSLLSLDSLSGSTTLSSTSKLGNLIRGITELTSKHEEEKLIQRELTSI
KEQVSSPNISTRQMKELMVRAIYCEMLGYEASFSYIHAIKLAQQGTGLEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAVLPLVEEKLNHPKEI
IRRKAVLALYKFYLIAPNQVQHIHNKFRKALCDKDPGVMTASLHIYFQMIQENPEGYKDL
TSSFVTILKQVVGGKLPMDFNYHSVPAPWLQMQLLRILAILGRNDQSTSEIMYEVLDESL
RRAEINHNITYAILYECVKCIYTIHPKSELLEKAAKCIGNFVLSLKINLKYLGLKALTYV
VQQDPKLALQYQMTIIECLDHSDLIIKHKTLELLFRITNAQNVSVIVEKMLAFLRVNKDD
YATIDLVGKVAELAEKYAPDNEWFIETMSTVFSVGGDMMQPDIPNSFLKLLSEGFDSVEE
DRKLRLFAVDSYISLLQGEPGKLPQRFLQVISWVLGEYSYLREELEAATVLRLLAKLLDM
KSTSSETKSWVLMAMTKLCEGGAGVSVIQEVCGTYCSSLDTLLRQRAQELQHLSQDCELR
ARVLPRGAGLERLEVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELAQAKALSLEPYGL
SLPISMSSCSIADRQSPTLLSVSSGLSGESPDLSHKGGTTTLKLDGVKRVWGREGYLSQS
EPVEEPAHVEVPSPLQSPSQQGEADRSHSQTPTPTPQPEQEKQQLASSLFVGLGSQSSVC
LMGKSESTTQRLRRKAKGPVSSSAASEQISNSPVSPPSTANNLLGNNLLDFNITSDLSVS
SLESTSQLSQGPAAANGICEVELTDMTESSPALMRDNGVAAADPTPHEDPDELKDACLRS
HLPAEFSGLCHSDITPLCTNQSLDFLACHLQKEDSLSLVVFIYNSSDSDIQQILLELDSD
ELEVSCVCGSAVQEARSHSVAVCQYSLTVKRPSVHVEVVGMASYRCPAETPQSARFSYKL
PLTSFIRPLTVSTEEYGAMWLDFSHDTKQKLTLGSDGRESLADTLNVLKKKLNLHVVEII
GEQTYGRYCSLPAPPRSAVSDALSPARGVAVRVAALSGARPARLPDVPLSESFTGALSRR
PPLLHLLH
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgttgtggagaagacgctgacagctctgccgagcctgctgtctttagactct
ctctctggatctacaacactgtcctccacctcgaaactaggaaacctcatcagagggatc
accgagttaacatccaaacatgaagaggagaaacttattcaacgtgaactgacatctatc
aaagagcaggtgtcctccccgaacatctccacgaggcagatgaaggagctcatggtgaga
gcgatctactgtgaaatgctgggttatgaggcttcgtttagctatattcacgccatcaaa
ctggctcaacaaggcactggtctggagaaaagagtcggttatctcgccgtgtctttgttt
ctgaatgaaagtcacgagctgcttctgcttcttgtgaacactgtattaaaggatcttcag
agcacaaatcttattgaagtgtgcatggcgctcactgttgtcagccaaatgttccccaaa
gatatgattcctgcagtccttcctctggtcgaggagaaacttaatcacccaaaagaaatc
attcgaaggaaagcagtcctggctctgtataagttctacctaatcgcgccgaaccaagtt
caacacatccacaacaagtttcgtaaagctctgtgtgacaaggaccctggcgtcatgacg
gcgtcactgcacatctactttcagatgatccaggagaatccagaaggttataaagacctg
acatcaagttttgtcaccatactgaagcaagtggtgggaggaaaactgcccatggatttc
aactatcacagtgttcctgctccatggctgcaaatgcagcttctccgaatactggctatt
cttgggagaaatgatcagagtacaagtgagatcatgtatgaagtcctcgacgagtcttta
cgaagagcagagataaatcataacatcacctatgcaatattatacgagtgtgtaaaatgc
atttacacaattcatcccaaatctgaacttttggaaaaagctgcaaagtgcatcggcaac
tttgttctgtcactgaagattaatctcaaatatctcggcttgaaggccctcacctatgtg
gtccagcaggatcctaaactggcccttcagtatcagatgaccatcatagagtgtctcgat
cactccgacctcatcatcaagcataagacactggagttgctctttcggatcactaacgcc
cagaatgtctcagtcatcgtggagaagatgctggcgttcctgcgcgtcaataaagatgac
tacgctacgattgacctggtggggaaggtggcagagttggcagaaaaatatgcaccagat
aatgaatggttcattgagaccatgagcacagtgttttcagtgggtggagacatgatgcag
cctgacatcccaaacagcttccttaaactgctgtctgagggctttgacagcgtggaggaa
gacaggaagttgaggctgtttgccgtggattcatatatttctctgctgcaaggagagcct
ggcaaactgccacagcgcttcctccaagtcatcagctgggtcctcggtgaatactcctat
ctgcgggaggagctcgaagcggccacggtcctgaggctgctggccaaacttttggacatg
aagagcaccagcagtgaaaccaagagctgggtcctcatggcgatgaccaagctctgtgag
ggcggggcaggtgtctctgtgatccaggaggtttgtggaacatactgcagctccctggac
acattgctgaggcagagggctcaggagctgcagcacctcagccaagactgtgaactacga
gccagggtgcttccccgaggcgccggcctggagcgcctggaggtggattcctctctgtcg
tttctggatggatttgtgtcggaggcgttggcagctggcgctgctccgtacaagcctccc
catcaacggcaggaggagctcgctcaggcaaaagcgttgagcctggagccgtacggcctg
tccctgcccatcagcatgtcctcctgcagcatcgcagacagacagtctcccacactgttg
tctgtgagctctggtctgtcaggcgaaagccccgacctctctcacaaaggaggcacaaca
actctgaagctggacggtgtgaagagggtgtgggggagggagggctacctgtcgcagagc
gaacctgtggaggagcccgcccatgttgaggtgcccagcccccttcagtcacccagccag
cagggagaggctgaccgttcccacagccagactcccactccgacccctcagcccgaacaa
gagaaacagcagctggcctcgtcgctgtttgtgggcctgggctcccagagctctgtgtgt
ctgatgggaaaatctgagtcgacaacccagcgactcagaagaaaagcaaaaggtccggtt
tcatcctcggctgccagcgagcagatatccaactcccccgtctctcctccgagcacagca
aataatttgctgggtaacaacctcctggacttcaacatcacctcagacttgtctgtttct
tcactcgaatcgacatcccaactctctcagggcccggctgctgcgaacggcatctgtgaa
gtagagttaacagacatgacggaaagtagccccgctctcatgagggataacggtgttgca
gctgctgatccgactccacatgaagacccagacgagcttaaagacgcgtgtctccgttct
catcttcctgcagaattctctggactctgtcactcagacatcactcctctgtgcacaaac
caatctctggatttcttggcctgtcatttgcagaaagaggattctttatcgctggttgtt
ttcatttacaactcctctgactctgacattcagcagatactactggagctggactcggat
gaacttgaggtatcctgtgtgtgtggcagtgcagtgcaggaggcgagaagccacagcgta
gcggtgtgtcagtattccctgactgtgaagaggccttcagtccatgtggaagtggttggg
atggcgtcttaccggtgtcctgccgagacgcctcagtcggcgcggttctcatacaagctt
cctctcaccagcttcatcagaccgttgaccgtgtccacagaggagtacggggccatgtgg
ctggacttctctcacgatacaaagcagaagctgaccctgggaagtgatggccgggaatct
ctcgccgacacgctgaatgtgctgaagaagaaacttaatcttcatgtcgtggaaatcatt
ggtgaacaaacgtacggaaggtattgtagcttgccggctcctccgagatcagccgtgtct
gatgcactgtcgcctgcacgcggggtcgctgtccgtgtggctgcgctctccggtgcccga
cctgcccgactgcctgatgtaccactgtcagagagctttacaggagcactgagccgccga
ccgccactcctccacttactgcactga
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