Pseudoliparis swirei (Mariana hadal snailfish): 130195757
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Entry
130195757 CDS
T09868
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130195757 (rnf115b)
04121 Ubiquitin system [BR:
pswi04121
]
130195757 (rnf115b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130195757 (rnf115b)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130195757 (rnf115b)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130195757 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
zf-Nse
TPR_14
Motif
Other DBs
NCBI-GeneID:
130195757
NCBI-ProteinID:
XP_056273438
LinkDB
All DBs
Position
1:7757027..7762389
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AA seq
289 aa
AA seq
DB search
MAEAADTPQHRFFCHGCKSETNPKLPDFVCPRCESDFIEEVTEDSSLLQNSPSVVSENSN
AFSELLFMERSALLSHPPSSESEPDDSEQVSAGQSCPSSMLPGAAEEAESPSQPEQERSP
RPEQRPAVEGMVHQFLADLFANNGNPGAAAAALSSMLQLHSNPGDYAWGQGGLDAVITEL
LGQLECKGPPPAEEEMISSLPTVCISQEQTDCRLQCPVCREEYSSGEPVRKLPCLHYFHS
ECIVPWLELHDTCPVCRKSLGGVDNSLPPTSEPPEARSIRTELQENQAI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggacacaccacaacaccggtttttctgtcacggttgtaaaagtgaa
acaaaccccaaactcccggatttcgtctgccccagatgtgagtctgacttcattgaggag
gtgacagaagactccagcctcctgcagaacagcccatcagtggtcagtgagaactccaac
gcgttctcagagctgctgtttatggagcgctccgctctgctgtctcatccgccctcttcg
gagtcggagccagatgacagcgagcaggtatctgcaggtcagagctgcccttcctcaatg
ttgccgggcgccgctgaggaagcagagtctccttcccagcctgaacaagagaggtcgccc
aggcctgaacaaaggcccgcagtggaagggatggtgcaccagttcttggccgacctgttt
gccaacaatggaaaccctggtgctgcagcagctgcactatccagcatgttacagctgcac
tcaaaccccggggattatgcgtggggtcaggggggtctggatgctgtcatcacagagttg
ttaggacagttggagtgcaaaggtcctccccctgctgaagaggagatgatatcatcgctg
ccaacagtctgtatctctcaagaacagacagactgcagactgcagtgtccggtttgtagg
gaggagtattcatcaggtgaacccgtcaggaagctaccgtgcctccattacttccacagt
gaatgtatagtaccttggctggaactgcatgatacctgcccagtgtgccgaaaaagcctc
ggcggtgttgataacagcctgccgcccacatcggaacccccagaagctcgctccatcagg
acggagctacaggagaaccaggcgatctga
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integrated database retrieval system
