Pseudoliparis swirei (Mariana hadal snailfish): 130195771
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Entry
130195771 CDS
T09868
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130195771 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130195771 (rbm28)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130195771 (rbm28)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130195771
NCBI-ProteinID:
XP_056273452
LinkDB
All DBs
Position
6:complement(15300060..15307862)
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AA seq
791 aa
AA seq
DB search
MPARTLYVSPLPASASNKRLEEIFSEIGPVKQCFVVNEKGSDKCRGFGYVTYAMEEDSQR
ALKEVKEYDGQRLSVVLAKRKLKEKKKTAPGEPAAAPKEKDAAPKEKVAAPKGKDAAPKV
NEQNKSVKKVNLKPKLIIRNLSFKCSEDDLKQILSKFGTVLEAKIPLKPDGKMRGFAFVL
FQNLFEAGKALHALNLKEIKGRQVAIDWAVPKEQFIATQPPSSAGNKIIEATTKKSGAKI
NTEVKEEKKPQAAPANKRVPSKSSVKQVEESQSDDDDDASEDQDSEVEEEEEDSDMKEEE
EEEEEDDDMSQEEEDDSEDDKSSDDSNDDEEDDEDMEADKSAKKRTSKKLLPSDVKEGRT
IFIRNLSFDTEEDGLEEVLLKYGELNYIKIVIHMETGHSKGCAFAQFKTKEAADKCRAAA
EEVAQNGGIRVDGRKLFVVDAVSKDDASKLKVDKVKVETGTRNMYLAREGLIRAGTKAAE
GVPEADMIKRTRFEEIKKTKLRALNVFVSKTRLCVHNLPKSVDNKKLKALCFQAVKGVTG
VRITECRVMYDKRPEKGQVMGQSLGYGFVQFQAHEHALSTLRYLNNNPDIFGSHKRPIVE
FSLEDSRKLKMKEMRQQKNKEQSLAFKRAAKPQPQTVGEGKGPSTSGNKAPSSSAQTINE
KAPVQTPEQRNRYFGFQTTPELEHVSLENGKKRKKILNFPSHRGPKIRLRDKGKPQAPPP
KKAKPGSNRKDRQRQQMEKPMQRSNQVKNAKKPSKRGGGDHFDSLVEKYKKKLMGNSDNC
TNVKRSKWFDS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacggaccttgtacgttagccccctgccagcttcagcttcaaataaacgacta
gaggaaatattctcggaaattggtccggtgaaacaatgcttcgtggtcaacgagaaaggc
tcagacaaatgccgggggtttggctatgtcacatatgccatggaggaagactcccagcga
gctttgaaagaagtaaaggaatacgacggacaaaggctttctgttgtactggcgaagagg
aaacttaaagagaaaaagaaaaccgcgcctggagagcccgctgcagcaccaaaagaaaaa
gatgcagcaccaaaagaaaaggttgcagcaccaaaaggaaaagatgcagctccaaaagta
aacgagcagaacaaaagcgtcaagaaagtcaatttgaaacccaaactcatcatcaggaat
ttgagttttaagtgctcagaagatgacctgaaacaaattttatccaagttcggaactgtt
cttgaggccaaaattcccctcaagccagatggaaagatgcgcggatttgcgtttgttctt
tttcaaaatctgtttgaggcagggaaagcactacatgctctgaacctgaaggagataaaa
ggtcggcaggtagcaattgactgggctgtgcctaaggaacaatttatcgccacacagccg
ccatcaagtgcaggaaataaaattatagaagcaactacaaaaaagtcaggtgccaagatt
aacactgaagtcaaggaagaaaaaaagccacaagcagcacctgcaaataaaagagtccct
tccaaatcatctgtaaagcaggtggaagaatcccaatctgatgatgatgatgatgctagc
gaggaccaagatagtgaggtggaggaggaggaggaagattcagacatgaaagaagaggag
gaggaggaggaggaagatgatgatatgtctcaggaagaagaggacgacagtgaagacgat
aagagtagcgatgattcaaacgatgatgaagaggatgacgaggacatggaagcagataaa
tcagctaaaaagagaacctcaaagaagcttctcccttcagatgtgaaggagggcagaacc
attttcatcaggaacctttccttcgatacagaagaagatggtcttgaggaagttctgtta
aaatacggagagcttaactacattaagattgttatccacatggaaacgggacattcaaaa
ggttgtgcatttgctcagttcaaaactaaagaggctgcagataaatgcagggcagcagca
gaggaagtggcacagaacggtggcatccgtgtcgatggcagaaagctgttcgttgtggac
gcagtgagcaaagatgatgcttccaagctgaaagtggacaaagtgaaagtggaaacgggc
accaggaacatgtatttggccagagaaggattgatccgggctggaaccaaagctgcagag
ggtgttcctgaagcagacatgatcaaaagaaccagatttgaagaaataaagaagaccaag
cttcgggccttgaatgtgtttgtgtcaaagactcgtctgtgtgtccataacctgccgaag
tcagtggacaataaaaaactcaaagccctctgcttccaagcagtgaaaggagtcacagga
gtccgcatcacagagtgccgagtgatgtatgacaagaggccagagaagggtcaggtgatg
ggacaatcattaggttatggctttgtccagttccaggcccacgaacatgctctcagcaca
cttcgttaccttaacaacaaccctgacatctttggctcacacaagagacctattgttgag
ttctccctggaggattctaggaaactcaaaatgaaagaaatgcgtcaacaaaaaaacaag
gagcaaagtctggcttttaaaagagcagcaaaacctcagccccagacagtcggagaagga
aaaggacccagcaccagtggaaataaagcaccatcctcatcggcgcagaccataaacgag
aaagctcctgttcaaaccccggagcaacgcaaccgctatttcggcttccagaccacccct
gagttagaacacgtcagtttggaaaatggaaagaaacgaaagaagattctaaactttcca
tcccatcgtgggcctaagatcaggctgcgcgacaagggaaagccacaggccccgcccccc
aagaaagcaaagcctggatccaacaggaaggaccgtcaaagacaacagatggaaaagccc
atgcagcgcagcaaccaggtcaaaaacgccaagaagccttccaagagaggaggcggggac
cactttgacagcctggtggagaagtacaagaagaaactgatggggaatagcgacaactgc
accaatgtcaaaagaagcaagtggtttgatagttag
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