Pseudoliparis swirei (Mariana hadal snailfish): 130195947
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Entry
130195947 CDS
T09868
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130195947 (zgc:173742)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130195947 (zgc:173742)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Topoisomerases
130195947 (zgc:173742)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
130195947
NCBI-ProteinID:
XP_056273760
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Position
6:complement(21262994..21293316)
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AA seq
755 aa
AA seq
DB search
MAREKDAKEEGEGGAKPKAVKVKRPSDNERAGNRGDASKNSSKSTKATEKTENGKSLNKV
KTPKTEALESASRESLKQEPEDDDFAAKEKGLKRKRIKDESMEGPSHSASSPTTSKKKNK
RHGQEEENDREARKRKSKERREKTVKKEEQTVKKEEGEHPVSIKAKRTKVEIEEARQLKI
KKKEEEEQSRWRWWEEEKYEDGVKWKFLEHNGPCFPAEYQPLPSNVHFLYDGKKVKLSLE
AEEVAFFFAQMLDHEYTTKKVFRENYFKDWRKEMTNEERSLIKDLDKCDFGEIHAMHKAK
VEARKNMTKEEKLVLKEANQKVVDEYGYCLLDHHKERIGNFKIEPPGLFRGRGEHPKQGM
LKKRIQPEYVIINCSKEARIPEPPAGHRWKEVRRDNSVTWLASWTENIQGSIKYIMLNAN
SKLKGEKDWEKYEIARKLKLCVDDIRNQYGQDLKSKQMVTRQRAVALYFIDKLALRAGNE
KEEGETADTVGCCSLRVEHITLHEKLEGNECVVEFDFLGKDSIRYYNKVPVITKVFKNLK
LFLENKQPGDDLFDRLNTGMLNKHLASLMAGLSAKVFRTYNASITLQQQLKELTNKSDNE
PEKLLSYNRANRAVAILCNHQRAPPKTFDQSMANLQAKIDARKETLALEKTELKQAKKEA
KTRSSSDPKLQNLVERKKAAVKRCEEQLLKLELQATDREENKQIALGTSKLNYLDPRISV
AWSKNTEVPIEKIYNKSLRDKFAWAIDMTEEDFEF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagagaaggacgctaaagaagaaggagaaggaggggccaagccaaaagcagtg
aaggtgaaaaggccgagtgacaatgaaagagctggtaaccggggagatgcgagtaagaac
agctcaaagtcaactaaagctacagagaaaactgaaaatggaaagtctcttaacaaggtc
aagacacctaagactgaagcactggagtcagccagcagggagtctctgaaacaggaacca
gaggatgatgacttcgctgcaaaggaaaaaggattgaaaaggaaaagaattaaagatgag
tccatggaaggaccttcacactctgcttcttcaccgactacctcaaagaagaaaaataag
cgacatgggcaggaagaagaaaatgacagagaagctcggaaaaggaaatccaaggaaaga
agagaaaagacggtaaagaaagaggagcagacggtaaagaaagaggaaggagagcatcca
gtctcaataaaagcaaagaggacaaaagtggaaattgaggaggcaagacagttgaagatc
aaaaagaaggaggaggaggagcagagccgctggagatggtgggaggaagagaagtatgaa
gatggggtgaaatggaagtttctagaacataatggaccatgcttcccggccgagtaccag
cctctgccaagcaacgttcacttcctctatgacggtaagaaggtgaagctgagcctggaa
gctgaagaggtggcgtttttctttgcccagatgttggaccacgagtacaccaccaagaag
gtgttccgggagaactacttcaaagattggaggaaggaaatgaccaatgaggagaggtcg
ctgattaaagatctcgacaagtgtgactttggagagatccatgccatgcacaaagccaaa
gtggaggccaggaagaatatgaccaaagaggagaaactggttttgaaagaagccaaccag
aaggttgtggatgaatatggctactgtctgctggaccaccacaaagagcgtattggcaac
tttaagattgagcctccggggctgttccggggtcggggcgagcatccgaaacagggcatg
ctgaagaagaggatccaaccagagtatgtcatcatcaactgcagcaaagaagcccgcatc
cctgagccgcctgctggccaccgttggaaggaggttcgacgtgacaactctgtgacatgg
ctggccagctggactgagaacatccagggctccattaaatacatcatgctgaatgccaac
tccaaactcaagggggagaaggactgggagaaatacgagattgcccgaaaactgaagttg
tgcgtcgacgacatccgtaaccagtacggccaggacctcaagtccaaacagatggtgacg
cgacaaagagcagtggccctctacttcatagacaagctggcactgagagctggtaatgag
aaggaggaaggagagacggccgacacggttggttgctgctcgctacgcgtggagcacatc
accctccacgagaaactggaaggcaacgagtgtgtggtggaatttgacttcctcggtaaa
gactccattcgctactacaacaaggtccccgtcatcaccaaggtttttaagaatcttaag
ctgttcctggagaacaaacagcctggagacgacctctttgaccgcctcaatacaggcatg
ctgaacaagcacctggcgtctctaatggccggtctgagtgccaaggtcttcaggacgtac
aacgcctccatcaccttacagcagcagctcaaggagctcacaaacaagtctgacaatgag
ccagagaaactgctgtcctacaacagggccaacagggcagttgccattctgtgtaaccac
cagcgggcgccgccaaagacctttgatcagtctatggcgaaccttcaggccaagattgat
gctcgaaaggaaacactggccctcgaaaaaacggagctgaaacaggccaagaaggaggcg
aagaccagaagcagttcagaccccaagctgcagaatctggtggagcgcaagaaggcggcc
gtgaagcgctgcgaggagcagctgctgaagttggagctccaggcgaccgacagggaggaa
aacaaacagattgcactgggcacctccaagctcaactacctggacccgcgcatcagtgtg
gcgtggtccaagaacacggaggtaccgatagaaaagatctacaataagagcctcagggac
aagtttgcgtgggccatcgacatgacggaggaggactttgagttctaa
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