Pseudoliparis swirei (Mariana hadal snailfish): 130195964
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Entry
130195964 CDS
T09868
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00071
Fatty acid degradation
pswi01212
Fatty acid metabolism
pswi03320
PPAR signaling pathway
pswi04148
Efferocytosis
pswi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
130195964 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130195964 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130195964 (cpt1b)
03320 PPAR signaling pathway
130195964 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130195964 (cpt1b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
130195964 (cpt1b)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130195964 (cpt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
130195964
NCBI-ProteinID:
XP_056273792
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Position
6:15779678..15790027
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AA seq
787 aa
AA seq
DB search
MAEAHQAVGFKFTVRPDGVDLKLSQEVIKNIYLSGVTAWKKRAILFKNGVLAGVYPASPS
SWLIVVIAMMSSLYIPIDPSLGMIEAIKESLPHREYLSVQTRAVLSAILFATGLWLFFIY
LLRYTLKALLSNHGWIFESHGKMSTSTKVWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
DTIQRYLESVRPLLNSDQYNQMEMLANDFKDSKAARLQRYLILKSWWGTNYVSDWWEEYI
YLRGRGPIMVNSNFYIMDLLYVTPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGTV
PMCSTQMERIFNTTRIPGIETDIVQHLTDRKHLVVYHKGRFFQVWLYTGGRHLLPSELET
QFQRILNDTSEPEPGELKLAALTAGNRVPWARARIKYFGQGGNKVSLDTIESAAFFLTLD
DEPEGYDPAKTKSLDSYAKSLLHGKCYNRWFDKSFTLISYPNGKMGINAEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDVNKGLPHPSRLQWKIPKECQEVIETSYLSAKQIAD
DVDFHGLLFHEFGKGLIKKCRSSPDAFIQLALQLAQFRDQGLFCLTYESSMTRMFRDGRT
ETVRSCTSEAVAFVRAMEDAGATNAQRLALFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
VSKYLGIDSPFLKKVLSEPWKLSTSQTPQQQLNLVDINKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPDTDSFRFGQHICNAMLDIQALFKPENDKKTVEHATHAHL
ENGKKHI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgcatcaggcagtgggcttcaagttcactgtgcggccagatggtgtggac
ctcaaactgagtcaagaggtcatcaaaaacatctacctgtctggagtgacggcatggaag
aagcgagccattctattcaagaatggtgtattagctggagtctatcctgccagtccgtcc
agctggctgatagttgtgatcgccatgatgagttccttgtatatccccatagacccgtct
ctaggaatgattgaagcgatcaaggaaagcctaccacacagagagtatttatcagtgcag
acccgagcggtgctgagtgccatcctgtttgccactggactgtggctgttcttcatctac
ctcttgagatacacactcaaagctctgctctccaaccacggatggatttttgaatcccat
ggaaaaatgagcacatcaaccaaagtgtggctgagcctcgtgaagatgttctctggccgc
aggccgctgctctacagtttccaggcctccttacccaggcttcctgtgcccagtgtggat
gataccattcaaaggtacctggagtcagtccgtcctctgctcaacagtgatcagtacaac
cagatggagatgttggccaacgactttaaagattcaaaagcagcccggctacagagatac
ctaatcctaaaatcctggtgggggacaaattatgtaagtgactggtgggaggagtacatc
tacctcaggggtaggggtcctatcatggtgaacagtaacttctatataatggacctcttg
tacgtgacccctacacaccgacaggccgctcgggcagggaacgtggttcatgccatgctg
cagtacaggcgcaaactggaacgtggtgaacatgcaccgctgagggctttggggacagtt
cctatgtgttccactcagatggagaggatatttaacaccacccgcatccctggaattgaa
acagatattgtgcagcacctgactgaccgcaagcacttggttgtctaccacaagggcagg
ttcttccaagtgtggctgtacactggagggcgccacctcttgcccagcgaactggagaca
cagtttcaaaggatcctcaatgatacatcagaacctgagccaggagaactcaaattagct
gccctgactgcaggaaacagagttccatgggctcgggctcgaattaaatatttcggccag
ggaggaaacaaagtgtccctggacaccatcgagtcagctgccttcttcctgacgctagat
gacgagccagagggttacgaccctgcaaagaccaaatcgcttgacagttacgccaagtct
ctccttcatggaaaatgttacaacaggtggtttgacaagtctttcaccttgatctcttat
ccaaatggaaaaatgggtattaatgctgaacattcttgggctgatgcaccaattgttgga
catatgtgggagtatgttcttgcaacagactgcttccatcttggctacacggaggagggc
cattgtaaaggtgatgtgaacaaaggtctgccccatccctctcgactgcaatggaaaatt
ccaaaagagtgccaagaggtcattgagacttcatacttgtcagccaagcagatagctgac
gacgtggacttccatggcttactatttcatgagtttgggaaaggattgatcaagaagtgc
cggagcagcccggatgccttcattcagttggccctgcagctggcacagttcagggaccag
ggtttgttctgtctgacttacgagtcatcaatgacccgtatgttcagagacggtcggaca
gagaccgtacgctcctgcacttctgaggctgttgcattcgtcagagccatggaggatgca
ggtgcaaccaatgcccagagacttgccctgtttcggaaagcagcagataagcatcaaaac
atgtatcgcctggccatgactggttctggtatcgaccgtcacctcttctgtctctacatt
gtgtccaaataccttggtattgactcgccattccttaagaaggtgctttcggagccctgg
aagttgtctaccagccagactccacagcagcagctcaatttagtggacatcaacaagttc
cctaaatatgtgggtgctggtggtggatttggcccagtggctgatgatggttatggtgtg
tcttatataatagttggggaaaacctcatcacattccacatctccagcaagttttccagc
ccggacacagactcattccggtttggtcagcacatttgtaacgccatgctcgatatccag
gcacttttcaagcctgaaaatgataagaagacagtggagcatgcaacgcatgcacatctg
gaaaatgggaaaaagcacatataa
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