Pseudoliparis swirei (Mariana hadal snailfish): 130195973
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Entry
130195973 CDS
T09868
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130195973 (lamb4)
04518 Integrin signaling
130195973 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130195973 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
Motif
Other DBs
NCBI-GeneID:
130195973
NCBI-ProteinID:
XP_056273810
LinkDB
All DBs
Position
6:26925..81792
Genome browser
AA seq
1789 aa
AA seq
DB search
MIFILFLVSLPAARLQEPQDGHDPCPSGSCNPQLGDLMVGRGPRLSASSTCGLDGPQSYC
IIGHLEEGQKCFTCDSRLPYDHHGNPDSHRIENVIATFDPERKTKWWQSENGLHQVSVRL
DLETMFKFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCFLSFPSVSNQPANGI
DDIICDSRYSGSDPSTNGEVVLKALDPIFEIGNPYAPNIQDLITLTNIRVNFTRLFTLGD
VLLSRRRRNPQDKYYYALYAMVVRGSCSCHGHAASCTPVDGGRGDVFTQTGMVHGRCVCQ
HNTAGENCERCQDFHHDSPWRPGGGTTANTCMRCNCNGHSDSCHFDATRFEATGMLSGGV
CEDCLHDRAGPQCERCRPFLFQDPQRAEDDQHACRPCDCDPAGSEGGGLCDALSGACVCK
GNVAGRRCHQCKLGFFNLRRDDAAGCRVCRCHVLGSVGSCDQLTGSCECVPLASGPLCDR
CLPGFWGLGHSGFRCSACDCDVGGAHSATCSPEDGQCHCLPNMVGRQCSDPTPRYFLPTL
DYFLYEAELAAPLQRSSTPLPPSPSPSSSLLDSVLLPQCEKYYRDQGYDFKFSNGRVVLV
RRTRHIARRWRRGQQNSLPLEAGHALQIVPRQRKADQSITWTGLGLVRVLEGAGLRFTVD
NIPSPMDYKLVIRYESEAPSDWLASVSIVTVSSGSGGCSSDPTGSRTLVLPANSRWGILD
PALCLNAGGQYFVDIVFNKQPRSDRSGSHLLVDSVGLIPTFDSLQEFCSQTNSHPFGCVG
LAVELQPEESLSDVCEGLLGSASAQVHNGAVLCRCNAAGSLGASCSKVGGSCDCRPNVIG
RCCDACAPLAFGSGPDGCEPCRCEPRGSLSEFCDQVRGQCECRSEVTGRRCDRCQTAFWR
FPSCRPCECNELSEECDEQTGECLNCREHATGPACDRCVEGYYGNPVSKQPCEPCLCPDV
ANSGRFFATSCHHQPPSLSLTCNCRNGHTGPRCDRCSPGFYGDLGSPGARCEECPCNNNI
NTGDRNSCDSRTGECRRCLYHTTGPRCQDCRPGYYGNALDQDCKECSCDRRGTEVTRCPL
GSPCFCDSRTGQCPCRTGVLGTLCDECVDGYWNLDGASGCQPCSCDSVNSFSNICNKVTG
QCPCQPEFGGRQCDECGENHFGNPDRQCISCDCNVEGTERPSCDPETGECLCRVGVSGIF
CDECSPGYDLAFPACSKCHPCNALWAGDVTDVQRAASRMRTFIPEVNKWPGDSRLQHMLK
MHAELDSLGNLTGLSPPTPEKLEKLCAKIRKLHDAVDPNVILIDPSPLLNTEMDHIGLEF
RKLLSTVKATRLPDPDDEDEDPDELLDETMKLHEAFMLDDKRVRNANRAVEDSMDTRQEV
KHKLNMCSSKGNMVSLEKVQELSLAHLNRMICGGPGLEDCSSCGGALCVLDFGKNKCGGP
KCDGVIPKSQNASETAERVKEQLLTLPSRLQASKNKINDAKQQAQDTKDQAKDLQDRINK
NIDSLSREKNKTNELIQQVKDYLTDEMVPPEDIEKMAQAVLDIQLPRPPDQIRSMINDIN
KLLSTTHNPPKTLEHTKTAQTLLQEAQKLKERAKNIDVTKISRDIYGAETAQDKANDDLD
TGSRDKDMAKDQIRDMNEKLDDIETKLMNRPSEDLQDKIEALKRKTEQNRETAKHAREAA
DSALNQTAHIEPKLDDAMKLFELLKKKRSNQSAEDEAGERVRKMMEEAEKIKEQVEDKLL
QLQGLEQKVQQLVQNKEDQVSEVSLLLQTMDSLRKEISKRAEGYVSCTA
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcctcttcctcgtttctcttccagcagctcgactccaggaaccccaggac
ggccatgacccgtgtcccagtgggtcttgtaacccccagctcggtgacttgatggtgggt
cgagggcctcggctgtcagcctcgtccacctgtggtctggatggaccacagagctactgc
atcattggacacctggaggaggggcaaaaatgctttacatgtgactctcgtctgccatac
gatcaccatggcaaccccgacagccaccgcattgaaaacgtaatcgcgaccttcgaccca
gagagaaaaacaaagtggtggcagtctgaaaacggacttcatcaagtcagcgtccggctt
gatctggagaccatgttcaagttcagtcatctggtcctaaccttcaagagtttccgtccg
gcagccatgttggtggagcgatcgaaagattttggacgaagctggaaggtttttcgttac
tttgcagaagattgtttcctttcgtttccgtcggtttccaatcagccagccaacggcatc
gacgatatcatctgtgacagcagatactctggatcagatccgtctaccaacggagaggtg
gtgctgaaagctctagatccgatctttgagataggaaacccgtatgcaccgaacatccaa
gatctgatcaccttgactaatatccgtgtgaacttcactcgtctgttcacgctgggcgac
gttctgctgagtcgacgacgccggaaccctcaggacaagtattactacgccctgtacgcc
atggtggtccgggggagctgctcctgccacggacacgccgccagctgcacgcccgtggac
ggagggcggggggacgtcttcacccagaccggcatggttcacggtcgctgtgtttgtcaa
cacaatacagccggagagaactgtgagaggtgtcaggactttcaccacgactccccctgg
aggcctggcgggggaaccacagccaacacctgcatgagatgcaactgtaacggtcactct
gactcgtgtcacttcgacgccactcgctttgaagcgacaggcatgctgagcggcggcgtg
tgtgaagactgcctccatgacagggcggggcctcagtgcgaacgctgccggcctttcctg
tttcaagatccacagagagcggaggacgaccagcatgcctgcagaccatgtgactgcgac
ccagcgggttcggagggaggcggcctgtgtgacgctctgagcggcgcatgtgtctgtaaa
ggaaatgtggcgggtcgccgctgccatcagtgcaaactgggcttcttcaacctgaggcgg
gacgacgccgccggctgtcgggtgtgcaggtgccatgttttgggaagtgttgggtcatgt
gaccagctgacaggaagttgtgaatgtgtccctttggccagcggtcctctgtgtgatcga
tgtctgccaggtttctggggtttgggacactctgggttcagatgttccgcctgtgactgt
gatgttggaggagctcacagcgccacatgttctccggaggatgggcagtgtcactgttta
cccaacatggtgggtcgacaatgctctgaccccacccctcgttacttcctgccgacactg
gactacttcctgtacgaggcggagctcgccgctccgctgcagagaagctctactcctctt
cctccgtcaccatctccttcttcttctctgttggactcagttcttttacctcagtgtgag
aagtattacagagaccagggttacgactttaagttcagcaatggaagagtcgttctggtt
cgtaggactcgacacatcgcccgccggtggagacggggacagcaaaacagcctccctctg
gaagcgggtcacgccctgcagattgttcctcgtcaaaggaaagctgatcagtccatcacc
tggaccggcctgggattggtcagagtgttggagggggcggggcttaggttcactgtggac
aacatcccttcaccaatggattacaagctggttattcgttacgagtcagaggctccgtct
gattggctggcttcagtcagcatcgtcacagtgtcttcaggcagcggcggctgcagcagt
gacccaacaggaagtagaactctggttcttcctgcaaactccaggtggggtatcctggac
cctgcgctgtgcctgaatgcaggcggtcagtactttgtggacatcgtgttcaacaagcag
cccaggtcagaccggtccggctcacacctcctggtggactcggtgggtttgatcccgacc
tttgactccctccaggaattctgctcccagacaaactctcatcccttcggctgcgtcgga
ttggctgttgagctccaaccagaagagtcgctgagcgacgtctgtgagggcctgctgggc
agcgcgtcagcacaagtacacaacggagcagtgttgtgcaggtgcaacgctgccggctct
ctcggagcatcctgcagtaaagtgggaggttcctgtgactgtcggcccaacgtgattggc
cgttgctgtgacgcgtgtgcgcccctggcgtttggctcggggcccgatggctgtgaacca
tgccggtgtgaacctcgcggctcgttgtcagagttctgcgatcaggtcagaggtcaatgc
gagtgtcgttcagaggtcactggtcggcgctgtgaccgctgtcagactgcattctggagg
tttccttcctgtcgaccctgtgaatgtaacgagctgtcagaagagtgcgacgaacaaacc
ggagagtgcctgaactgcagggagcacgccactgggccggcgtgtgacaggtgtgtggag
ggttactatggtaacccagtctccaaacagccctgtgagccctgcctgtgtcccgatgtt
gcaaacagcggacgattctttgccacgtcatgccaccaccaaccaccatccctcagtctc
acctgtaactgcaggaatggacacacaggtccacgctgcgacagatgcagccctggtttc
tatggcgaccttgggtcgccaggcgcccgctgtgaggagtgtccctgcaacaacaacata
aacaccggagaccgtaactcctgcgacagccggacgggagaatgtcggcgctgcctctac
cacaccacgggcccccgatgccaggactgcagacccgggtactacgggaacgccctggac
caggactgcaaagagtgctcttgtgaccggcgggggacagaggtgactcggtgtcctctg
gggagtccttgtttctgtgattcaaggacaggacagtgtccctgcaggacgggggttttg
ggcaccctttgtgacgagtgtgtggacggatattggaacctggacggtgcatcggggtgt
caaccctgcagctgtgattctgtgaactccttctcaaacatctgcaacaaggtgacggga
cagtgtccttgtcaaccggagtttggtggacgacagtgtgacgaatgtggagaaaatcat
tttgggaatccggaccggcagtgcatctcttgtgactgcaatgtcgaggggactgagcgc
ccgtcatgtgatcctgaaaccggcgagtgtctctgccgggtcggtgtctccgggatcttc
tgtgacgagtgctcccctggatatgacttggcgttcccggcctgcagcaagtgccatcca
tgcaacgctctctgggccggagacgtcaccgatgtccagcgagccgcctcgaggatgaga
accttcattcctgaagtcaacaagtggcccggcgacagccgcctgcaacacatgttaaag
atgcacgccgagttggacagcctgggcaacctgacgggactctccccgccaacgccggag
aagctggagaaactttgtgcaaagatcaggaagctgcacgatgccgtcgacccgaatgtt
atcctgatcgacccgtctcctctcctaaacactgagatggaccacattggtctggagttc
agaaagctgctgagcactgtgaaggcaacacgtctgccggatccagacgatgaagatgaa
gacccagacgagttgctggatgaaaccatgaagcttcatgaagccttcatgttggacgac
aagagagtgagaaacgccaaccgagctgtggaggactccatggacaccagacaggaagtc
aaacataaactgaacatgtgcagcagcaaaggaaacatggtgtcgctggagaaggttcaa
gagctcagtctggcccatctcaaccgaatgatctgtggaggacccggtctggaggactgc
tcaagctgtggtggagctctgtgtgttctcgattttggaaaaaataaatgtggaggtcca
aagtgtgatggagtcattccaaaaagtcagaacgcttcagagacagcggagagagtgaag
gagcaactcctcacactcccatcccgtctgcaggcgtccaagaacaagatcaacgatgcc
aagcaacaagctcaggacaccaaagaccaggccaaagacctccaggaccggatcaacaaa
aacattgactccctaagcagagagaaaaataaaaccaatgagctcatccagcaagtcaaa
gattacctcacagatgagatggttcctccagaggacattgagaaaatggcccaagctgtt
ctggacatccagctgccacgaccaccagatcagatccgatcaatgatcaatgacatcaat
aaactgctgtccaccacacacaatccccccaaaaccctggaacacaccaagactgcccag
accctgctgcaggaagctcagaaactcaaggagcgtgcaaagaacattgatgtgaccaag
atcagcagagatatttatggagcagagacggctcaggacaaagccaacgacgacctggac
accggcagccgagacaaagacatggccaaagaccaaatcagagacatgaacgagaaacta
gacgacatcgaaacaaagctgatgaatcgtccatctgaagatctgcaggacaagattgaa
gccctgaagaggaaaactgagcagaaccgagagacagccaaacacgccagagaggctgca
gactctgctttaaaccagactgctcacatcgaaccaaagctggatgatgccatgaagctg
tttgagctgttaaagaagaagaggtccaatcagagcgctgaagatgaagctggagagcgg
gtgaggaagatgatggaggaggctgagaagataaaggaacaggtggaggacaaacttctc
cagctccaaggtctggagcagaaggtccagcagctggtccagaacaaagaggaccaggtc
tctgaagtctccctgttgttgcagacgatggactccctccgcaaggagatctccaagcgg
gccgagggatacgtcagctgtactgcatag
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integrated database retrieval system
