Pseudoliparis swirei (Mariana hadal snailfish): 130196050
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Entry
130196050 CDS
T09868
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130196050 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130196050 (srsf4)
Spliceosome [BR:
pswi03041
]
Common components
Common spliceosomal components
SR proteins
130196050 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130196050
NCBI-ProteinID:
XP_056273875
LinkDB
All DBs
Position
1:complement(4545315..4552672)
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AA seq
432 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGSGGSERGGGGDRGSDRGGGGDRGGGDRGGGDRGGSDRGG
GSGGGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKG
RRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRKRSYSRSRSHSRSRSRS
RRSRKSRSRSDSSSRSRSRSRAASLSRSRSRSKKIRSKKEEERSNGAPKNKERSRSRSPK
SRSPKSKKIKKDEKKTKKDDSRSRSRSRSRSRSRSRSRSGIKDRSRKSISKGREAPKSDG
EVERGSRSRSRSPVEANASTRSKSKSKSPSPAKPRSRSASRSESRSKSRSKSRSKSRSKS
RSQSRSRSRSRS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtgtacatcggaagactgagctaccgggccagagaaaaggacgtggagaga
ttcttcaaaggctacgggaagatactcgaagtcgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccacgtgatgcagatgatgctgtgtatgacttgaacggcaaggagttg
tgtggggagagggtcattgtggagcacaccaagggaccccgtcgggatggaggttatggt
ggtagtggcggcagcgaaagaggcggcggcggggatagaggcagtgatagaggcggcggc
ggcgatagaggcggcggcgacagaggtggaggcgatagaggaggcagcgatagaggaggt
ggtagcggcggcggcggaagaagtggatatggtcgctggggaagagacagatatggtcct
cccataaggacagattatcggctcattgttgagaatctttccagccgctgcagctggcag
gacttgaaggactacatgaggcaggcaggggaggtgacttacgccgacacccacaagggc
cgcaggaacgagggggtgatcgagttcaggctctactctgacatgaagagggctctggag
aagctcgacggcaccgaggtgaacggcagaaagatccggctcatcgaggaccgccccgga
gcccggcgcaagcgctcctattctcgcagccgcagccactccaggtctcgctccaggagc
cgcaggtctcgcaagagccgcagccgcagtgacagcagcagccgcagccgcagccgctcc
agggcggcgtccctctcccgcagccgatcccgtagcaagaagatcaggagcaagaaggag
gaggagcgcagcaacggcgcgccgaagaacaaggagcgcagcaggagccgcagccccaag
agccgcagccccaagagtaaaaagattaagaaagacgagaagaagaccaagaaggatgat
tcccgctccaggtctcgctctcgctccaggtctcgctccaggtctcgctccaggtcgggg
atcaaggatcgctccaggaaatccatctccaagggccgcgaggcgcccaagagcgacggc
gaggtggagcgcggctcccgctctcgctctcgctcccccgtcgaagccaatgccagcacc
cggtccaaatcaaagtccaagtccccctcccccgccaaaccccggtcccgctccgcctcg
cgctccgagtcccgctcaaagtcccgttctaaatctcgctccaaatcccgatccaagtcc
cgctcccagtctcgttctcgctcccgttcccgctcgtag
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