Pseudoliparis swirei (Mariana hadal snailfish): 130196112
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Entry
130196112 CDS
T09868
Symbol
fbxo4
Name
(RefSeq) F-box only protein 4
KO
K10291
F-box protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130196112 (fbxo4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130196112 (fbxo4)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130196112 (fbxo4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
130196112
NCBI-ProteinID:
XP_056273949
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All DBs
Position
7:complement(26656429..26662315)
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AA seq
449 aa
AA seq
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MPRDSQQQGSKTERRVVTARNIDITVIHALRVHYRPAPNVMAAKTQQLNESAVIRRLRRF
RDRYFPNGGKVVEDDLTSAADTVGEPQPGFMDSLPVDVQFLIMTFLSPASICSLGATSRY
WRAMVRDPLLWRYFLLRDMPNWPSIDHVSMPQLELLDTPLIDEDESLDDREEWDFKGTEL
KVDYMSEYLKGCPSSRRQWLPSRPAYEVVTSFLQSLVPAAEPRYAMFGPGMEQLDVSLVT
RLMYAPDVLPVSGTPQRQIHGIGSGISYIFNNQHKFNILTLYSTNRAEREKARLQQQTIS
NKLFTCEGTDESGCPIYSPAPQVQPVCQAVDGFIYVANAEPGRGDGKSEAVQIRAMLSSA
EVSATRPLLVLSCVSREESEEVRVTRLQTMTSGNGARCRTPCVDIAKRLGLPQLANPWMV
QDIVAESLSGLLDGVSWLLRRSRVKLSGS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacagccaacaacaaggaagtaagacggagcgacgtgttgtcaccgctcgc
aacatcgatattacagtgattcacgcgctgcgcgtacattatcgacccgctcctaacgtc
atggcggcaaagacccagcagctcaacgagtcggcggtgatccgcagactccggcggttc
agagatcgatattttccaaacggtggtaaagttgtcgaagacgatttgacgtccgctgcg
gacacggtgggagagccacagccgggtttcatggatagtttaccggtggacgtacagttc
ctgatcatgacttttctgtctccggcgagtatttgcagcctgggagccacaagtcggtac
tggagggccatggtcagagatccgttactatggaggtacttcctgctcagggacatgcca
aattggccctccattgatcatgtgagcatgccccaactggagttgttggacacgccactg
atcgatgaagacgagagcctggacgatagagaagagtgggacttcaaagggacggaattg
aaagttgactacatgtcagaatacctgaaaggctgcccgtccagcagacgacaatggctt
ccctcgcggccggcgtatgaggtcgtgacctcttttcttcagtctctcgtgcccgcagcc
gagccgcgttatgccatgttcggccccggcatggagcagcttgacgtctctttagtcacc
aggctcatgtatgctccagatgtgctccctgtgtcgggcactcctcaaagacagatacat
ggtattggctcagggatcagttacatcttcaacaaccaacacaaattcaatatcctgact
ctgtactcgaccaatcgggcagagagggagaaagccagactgcagcagcagaccatcagc
aataaactttttacctgtgaaggaaccgatgagtcgggctgtccaatctacagccctgct
cctcaggtccagccagtgtgccaggcggtggacgggttcatctacgtagccaacgcagag
cccgggagaggtgatgggaagtccgaggcggttcagattcgggccatgctgagctctgct
gaggtttcagcgaccaggcccctgctggtgctctcctgtgtctccagagaagaatcggaa
gaagtccgggttacccgcctgcaaaccatgaccagcggaaatggggccaggtgtcgaact
ccctgtgttgacatcgcaaagagactcggactaccccagctggctaacccctggatggtg
caggatatagtagcagaatccttatcgggtcttctggacggcgtctcctggctgcttcga
cgttctcgagtcaaactctctgggagctag
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