Pseudoliparis swirei (Mariana hadal snailfish): 130196121
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Entry
130196121 CDS
T09868
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130196121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130196121
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130196121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
SPO22
XLF
Motif
Other DBs
NCBI-GeneID:
130196121
NCBI-ProteinID:
XP_056273961
LinkDB
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Position
7:complement(4185485..4218288)
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AA seq
295 aa
AA seq
DB search
MSGTVRQITVATDPGTPYFLRVDWALDPGAGFTLALADGSSAWIGEVSEDEVTWEANNAG
ATRERYVEDLLQALTGGEGERRGGDKAVYSFLFSPDRCRLSYQKSCNDISVHLGSVELQP
APDPLELNQKMIGQSLKRSTDLQSKNCQLLEENCRLNREHQIILRELERQAEEKEMLEDG
LYSRFVMVLNEKKAKIRSLQDVVRQLHQTDGKQRDEEGRLRDENTTRGEDGSQDRREETV
QSIHASQEPTILLTGQSPVCHGISVDRTFSDEEDEDEERSRKRRLRRSPEPREQK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtacagtccgacagatcaccgtcgctactgatccaggcaccccttacttcctg
cgagtggactgggccttagacccgggtgccggattcacgttggctctcgccgatggcagc
tcggcgtggatcggagaggtttcagaagatgaggtgacgtgggaagccaacaatgcgggc
gccacaagggaaagatacgttgaggatcttctccaagcgctaacgggaggggaaggagaa
aggagaggaggcgacaaggcggtctactctttcctcttctctccggatcgctgtcgcctc
tcgtatcagaagagctgcaatgacatctcggtgcacttgggttccgtggagctccagccg
gctccggacccactagagctgaaccagaagatgattggccagtctctaaagcgcagtacc
gatctgcagtccaagaattgccagctgttggaggaaaactgtaggctgaaccgggagcac
cagatcattctcagagagctggagaggcaggctgaagaaaaagagatgttggaggacggg
ctgtactcacgttttgtcatggtgctgaatgagaagaaggccaagatcaggagcctgcag
gatgtcgtccgccagctccatcagactgacggcaagcagagggatgaggaaggaagacta
agggacgagaacacgactcggggtgaagacggcagtcaggacagaagagaggagacggtg
cagagcatccatgcgtctcaggagccgactattctcctcacaggtcagagtccggtgtgc
cacggcatctccgtggaccggaccttttccgacgaggaagatgaagatgaagagcggagc
cggaagcgtcggttgcgtcgcagcccagaacctcgcgagcagaaataa
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