Pseudoliparis swirei (Mariana hadal snailfish): 130196158
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Entry
130196158 CDS
T09868
Name
(RefSeq) rho-related BTB domain-containing protein 2-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130196158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130196158
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130196158
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130196158
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
130196158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
130196158
NCBI-ProteinID:
XP_056274016
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Position
7:4803480..4814697
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AA seq
721 aa
AA seq
DB search
MERCSVARSSANPMHHFLMLRSQQTDSDMDYERPNVETIKCVVVGDNAVGKTRLICARAC
NATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFA
YGRSDVVVLCFSIANPNSLYHVKTMWYHEIKHFCPRAPVILVGCQLDLRYADLEAVNRAR
RPLARPIKSNEILPPERGREVAKELGVPYYETSVVAQFGVKDVFDNAIRAALISRRHLQF
WKSHLRNVQRPLLQAPFLPPKPPPPLITVPPPPTTTEEHPVGLLEDPHCADVILVLQERQ
KIFAHKIYLATSSSKFYDLFIMDAHKEAAERPARGPLSGRELLMRAASFDVCELGDDGDR
ANLRACTSDGTLKDSDGARRGRLLSSCSRAFVSIQEELVDDPVTYSPRPMTVVHMDRSMQ
LGPFRAVLRYLYTGQLDENEKELMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAF
HVRRTNRVKECLAKGTFSDVVFKLDDGTIMAHKPLLISSCDWMAAMFGGPFVESCTKEVL
FPNTTRSCMRAVLEYLYTGRFCSRADLDAMELIVLANRLCLPHLVALTELYTVTVLTEAA
MTGTDIDGDVLVDLDMAQFHGAQQLTGWCLHHICTNYNSVCRKFPREMKAKSTENQEYFE
KHRWPPVWFLKEDDHYQRARKERDKEDYLYQRRQCKRKWLFWNVPSSPNSNSPSSGSSAV
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctgctctgtagctcgttcatccgccaacccgatgcatcacttcctcatgttg
cggtcccagcagacagattctgatatggactatgagaggcctaacgttgaaactatcaag
tgcgtggtggtgggagacaatgcagtcgggaagacccgccttatctgtgcccgggcctgc
aatgccacactgactcagtaccagttactcgctacacatgtgcccacagtctgggcaatt
gaccagtacagagtatgccaagaggtattagagcgctccagagatgtggtggatgaagtc
agcgtgtcccttcgtctctgggatacgtttggagaccatcataaggaccggcgttttgca
tacggcaggtcggatgtagtggtgctgtgcttttcaatcgccaaccccaactctctgtac
catgtgaagaccatgtggtaccatgagatcaagcacttctgcccccgtgctcctgtcatc
ctggttggctgtcagctggacctgcgctatgcagacctggaggcagtgaacagggcacgg
aggcccttggctagacccattaaatccaacgagatccttcctccagagagaggccgggag
gtggccaaggagttgggcgtgccatattatgaaaccagtgtcgttgctcaatttggagtc
aaggacgtctttgacaatgccatccgagctgcactcatctcacgccgacacttgcagttt
tggaaatctcacctcagaaatgttcagcggcctctccttcaggcgcccttcctgccaccg
aaacctcccccgcctctaatcactgtgcctcctcccccaaccaccacagaagagcatccg
gtcggccttctggaggacccacactgtgcggacgtcatcctggtcctgcaggagcggcag
aaaatctttgcgcacaagatatacttggcgacgtcctcttccaagttctacgatctcttt
ataatggacgcacataaggaggccgccgaaaggcccgctcgcggccccctctcgggcaga
gagctgctgatgcgtgctgcgagctttgatgtttgcgaactgggcgacgatggagacagg
gccaacctgagggcctgcaccagtgacggcaccttgaaagactctgatggggcccgacga
ggccggctgctgtcttcgtgtagccgagccttcgtcagtatccaggaggagttggtcgat
gaccccgtcacatacagccccaggcccatgactgtcgtgcacatggaccggtccatgcag
ctcgggcctttccgagctgtgctccgctacctgtacacgggtcagttggacgagaacgag
aaagagctaatgcacattgcacacatcgctgagctgctggaggtgtttgacctgaggatg
atggtggcaaacatactcaacaatgaagccttcatgaaccaagagatcaccaaagccttc
catgtgcggcgcacaaaccgagtcaaagagtgtttggccaaaggcaccttttctgatgtc
gtattcaagctagatgatgggaccatcatggcccacaagcctttgctcatctctagttgc
gattggatggcagcgatgtttggcgggccttttgtggagagctgcaccaaagaggtgctg
tttccaaacacaactcgcagctgcatgagggctgtgctagaatatctctacacagggcgg
ttttgttctcgggccgacctggacgcaatggagctcatcgttcttgccaatcgtctttgc
ctcccccacttagttgcacttacagagctctacacagtaacggtattgacggaggctgcg
atgacggggactgacattgatggagacgtgcttgtggacttggacatggcccagttccac
ggcgcccagcagctcaccggttggtgtcttcaccacatctgcaccaactataacagcgtc
tgccgcaagtttccccgagagatgaaggccaagtctacagaaaaccaagaatactttgag
aaacatcgctggccacctgtgtggtttctgaaagaggacgaccactaccaaagggcacgc
aaagagcgcgacaaggaggactacctgtaccagagacggcaatgcaaacgcaagtggctc
ttctggaacgttccttcctcccctaactcaaactctccttcttctggctcgtctgctgtc
atctga
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