Pseudoliparis swirei (Mariana hadal snailfish): 130196285
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Entry
130196285 CDS
T09868
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196285 (gapvd1)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130196285 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
130196285
NCBI-ProteinID:
XP_056274236
LinkDB
All DBs
Position
7:6749327..6775861
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AA seq
1497 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKLLIQRLNSDVLKTAERLYRTAWIAKQQRINLDRLIL
TSVEASPAECCQHANMLEDTQFVDGYKTLGFQETIYGEFMARLRENPRLVASCLVAGEKL
SHEHTQGVAYTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLEIDPAKVTERLTPAQHERFGEKGSE
GYKQRVQAAVEDNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMTDDNADPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYISHNHLLVLVDFVR
SVIAGDHLREEEHMALENLVANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDATASTLSAHIPLVTPFADYGFSLPAARSRSRTNIAQEGEAEASSQESLQE
LMPEEVLVISLGTGPQSVPGMMSENEVLNLQMADGAQADGHADDTKQHGKPDKTLRFSLC
SDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDD
KLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSL
LCLPGSGSVLLDPFGSTISETTSEAWSVEVLPSDSGRDPEAPDLKQEERLQELESCSGVG
STSDDTEVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGE
ESGHGANHLTSPQSQADSLLAMFDPLSSGEGSSTGTIVRPKVHYARPPHPPPDPPIPEAS
ALGQETRHSLFMPHCLAQAELEHTKQRHSFPDKLVRSRSSDIVCPGRRPTSDPGLNRRVA
VEERDPAGAFALGPSSSPSKDSLKGEAEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWT
AESDVPAPIAAFRKRDKHEKDDIIPERVPQDDPLPRQSSQTQAAEDILDKYRNIKRTSPS
DGATGGASYDGTGDLCVEDSVHDSPREDPLQNVSTDDLPDSASQTAQQHDCKFSFSDAKK
KLRLALCSADSVALPIMALATTRNGLPDHMDSDDNEIVCFLKIQLAEAINLQDKNQMAQI
QETTRCVTRFDARTCRKLLAAIADDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRD
KEVANRYFTTVCVRLLLEHMEAKTLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMARDAI
WQYASEDQLQDAQMAIERSVMNRIFKLAFYPNLDGDSLRDQLLHEHIQRLIKVVTANHKA
LQIPEVYLKEAPWPSAQSEIRTINAYKTPRDKVQCVLRMCSTIMNLLSLANEDSVPGADD
FVPVLVFVLIRANPPCLLSTVQYINNFYASRLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gcatcggagaaactgctgatccagaggctcaacagtgatgtactgaagacagctgagaga
ctataccggaccgcatggattgccaaacagcagaggatcaaccttgatcgtctcattctc
accagtgtggaggcctcgccggctgaatgctgccaacatgccaacatgctggaagacaca
cagtttgtcgatggctacaagacgctgggcttccaggagacgatctacggcgagttcatg
gccaggttaagggagaacccgagactggtggcttcctgtctggtggctggagagaagctg
agccatgagcacacccagggggtcgcctatacagtcttcacctccctttatggcaactgt
atcatgcaggaggatgagagctacctgctacaggtgttgagatatctggtcgagttcgag
ctgaaagagagcgacaaccctcggcgccttctgcgacggggaacctgtgccttcagcatc
ctcttcaagctcttttccgagggcctgtactcggccaagctcttcctcaccgctaccctc
cacgagcccattatgcagctgctggtggaagatgaagaccacctggagatcgatccagcc
aaggtgacggagcgcctcactccggcccagcacgaacgcttcggagagaagggctctgag
ggctacaaacaaagggtgcaggcagctgtggaggacaatgaagccaagctggtagctctg
gtcaacaagtttattggttacctcaagcagaacacctactgctttccccacagcctgcgc
tggattgtgtcacagatgtacaagactctgtcatgtgtggagcgtctcgaggtgggcgag
gtgcgcaccatgtgtacagacctgctgctgacctgcttcatctgcccagctatagttaac
cccgagcagtacggcatcatctcggatgcccccatcaatgaagtggcccgcttcaatcta
atgcaggtggggcagcttttgcagcagttggccatgaccgatgacaatgcggacccaagg
cgtaaaagcagtttgtctaaatttgataagagctgtgtagctgcctttctggatgtggtg
atcggaggaagagcagtcgagaccccacccatgtcttcaatgaaccttcttgaaggcctc
agtcggactgctgtctatatttcccataatcatctgctcgtgttggtggactttgtgcgt
agtgtgattgcaggggaccaccttcgggaggaggagcacatggctctggagaacctggtt
gccaacgtgccccagtctcgaaccgtgaagagcaacagtctggagctcactccctccaac
accccccagctctccccagctaccactcctgccaacaagaagaacagactccccatagga
caacacttagccgctataacatcctgggacgccacagccagcactctgtctgcccacatt
ccattagtaacccctttcgcagactatggcttttcattaccagctgcccgtagccgcagc
cgtaccaacatagcccaggagggggaggcagaggccagctcccaggagtccctacaggag
ctgatgccagaggaggtgctggtgatttcactaggaactggtcctcagtctgtccctggg
atgatgtcagagaatgaggtgttgaacctgcagatggctgatggggcccaggcggatggc
catgctgacgatactaagcagcatggtaaaccagacaaaacccttcgcttctccctctgc
agtgacaacttggaaggaatctcagagggcccatccaatcggtcgaactctgtgtcctct
ctggacctggagggagagtctgtttctgagctgggagccggaccgtcggggagcaacggg
gtggaggctctacagcttttggagcatgaacaggccacaactcaggacaacctggatgac
aaactgcgcaagtttgagatcagagacatgatgggtctgaccgatgatcgcgacatctct
gagacggtcagcgaaacctggagcaccgatgtgctcggcagtgactttgaccccaacatg
gatgaagatcggctgcaggaaatagcaggggcagccgcggagaacatgctcggcagcctg
ctgtgtcttcctggctcgggttcagtgctgctggaccccttcggctccaccatctcggag
accacaagcgaggcttggagcgtggaagtccttcccagtgactcgggtagggatccagaa
gctccggacctaaaacaggaggagcgtctgcaggagctagagagctgttcaggggttggc
agtacctccgatgacacggaggtcagagaggtcagctcgagaccaagcacaccaggcctc
agtgttgtctcaggcatcagtgcaacctccgaagacatccccaataagattgaggacctg
cggtcagagtgcagctcagactttggagggaaagactctgtgacgagtccagatggggag
gagtcaggccacggagcaaaccatctgacatctccacagtcacaggccgattccttactg
gccatgttcgatcccctctcctccggtgaaggctcctctactggaacaatagtgagaccc
aaagtgcactacgctaggccccctcaccctccccctgatcctcccatccctgaagccagt
gccctggggcaggagacgcgccactctctcttcatgccccactgcctggcccaggctgag
ctggagcacaccaagcagcgccactccttcccggacaagctggttcgtagccgcagctct
gacattgtgtgcccagggcgccggcccacaagtgaccccggccttaaccggcgggtagcg
gtcgaagagcgcgaccctgccggggccttcgccttaggaccgtcctcgtcccctagcaag
gactctctcaaaggagaggctgaggacagaaaggacagtgacgacgagaagtctgatcgc
aacaggccgtggtggaagaagcgttttgtttcagccattcccaaagtgctgtattggacg
gctgagagtgatgtcccagctccgatagctgcatttcggaaaagagacaagcatgagaaa
gacgacattatcccagagcgtgtcccacaagacgacccattgcccagacagagctctcaa
actcaggcagctgaagacattctggacaagtacaggaacatcaagcggaccagcccgagt
gatggagccacaggtggagcttcttatgatggtacaggagatctttgtgttgaggacagc
gtccatgactctccgagagaagaccctctgcagaacgtttccactgacgacctcccagac
tcagccagccagacggcacagcagcatgactgcaagttctctttcagtgatgcaaagaag
aagttgaggttggcattgtgttctgcagactcggtggctctgcccatcatggctcttgcc
accacacgaaacgggctgcctgaccacatggactctgacgacaatgagatcgtctgcttc
ctgaagatccagctagcagaggccatcaaccttcaggataagaaccagatggcccaaatc
caggagacgacgcgctgcgtcacccgcttcgacgcgcgtacctgcaggaagctgctggcg
gccattgcggatgattacagaaagcgggccccatacatcgcctatctaaccaggtgtcgt
cagggcctgcagacttctcaggcccacctggagaggctcctccagagggtgctgagagac
aaggaggtggctaaccgctacttcaccaccgtgtgtgtccggctccttcttgaacacatg
gaggctaagacgcttgacttcataaaagcgttccaggggtgcacagcatcggatgacaag
acggcagcagtggaggattttctgcgttacttgtatggcgccatggcccgtgatgccatt
tggcagtacgctagcgaggaccagctgcaggatgcccagatggccattgagcgcagcgtt
atgaaccgcatcttcaaactggccttctaccccaacttggacggagatagtctcagagac
cagcttttgcatgaacatatccagcggctcataaaagttgtgacggccaatcataaagct
cttcaaatcccagaggtctatctgaaggaggctccctggccctctgctcagtctgagata
aggaccatcaatgcatacaagacgccaagagacaaagtccagtgtgtactgcgcatgtgt
tccaccatcatgaacctcctcagtctggccaatgaggactctgtccccggagcggacgac
tttgtccccgtacttgtctttgtcctcatcagggcaaacccgccctgcctgctgtccacc
gttcagtacatcaataatttctatgccagccggctgagtggggaggagtcctattggtgg
atgcagttcaccgcggcggtggaattcattaagaccatcgacgatcgcaagtga
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integrated database retrieval system
