Pseudoliparis swirei (Mariana hadal snailfish): 130196305
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Entry
130196305 CDS
T09868
Symbol
susd1
Name
(RefSeq) sushi domain-containing protein 1 isoform X1
KO
K23819
sushi domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130196305 (susd1)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
Sushi domain-containing proteins
130196305 (susd1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sushi
EGF_CA
Fn3_PTPRU
cEGF
EGF_3
HRM
fn3
Motif
Other DBs
NCBI-GeneID:
130196305
NCBI-ProteinID:
XP_056274289
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All DBs
Position
7:10423836..10442830
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AA seq
968 aa
AA seq
DB search
MDERNRAMIVVILLFAEVPAKGHMLDVCATCHANAHCDDKLDGSGKVCNCKYGFVGNGIT
YCQDKDECQIGDNKICGQHTTCQNTYGSYYCTCLAGYSPSNNMSVFIPNDGTHCQDIDEC
SIAGSCGAGAQCRNLEGSFDCSCQLGHQVHNGVEPFHPARDNASCKVVDCGPPASVEDTE
LRSVTGTTYSSVATFVCDEGFVWRSGANSSVCGADGRWEGPNMVCEEDDCGSPPALPHSH
VLWNKSSRVGTNVVYQCNSGYHNVGTGNVSICTSTGQWERPPMLCQEAVCGSPPVIEYTE
QVWDSHSTPGSTVLYVCKEGFYYKGGLNISMCNENAQWTPPTLSCQDVLCGDPPTLPHTG
RVWNGSSSLGSTVIYDCNIGFYHREGNNMSLCSINGYWTKPNISCKEVDCGVPPPIPHSI
MLWDQISTLGSQVVYQCNSGYRRVGEGNVSACTASGDWVGASLLCQGTHDIKLTQWSLGL
PDLRKGYHAIFMSAILHNFHDVVELNECSCSTGITTTTCVHYPAMTCCLVVVEISCQEPV
FKPRAKTMWDGTSHIGTVVHYQCEEGYYTSGLRNYSVCGENGLWEDIDLWCEEVSCGPPL
TLPHTNLGWDGTSRPGSVVLYECVEGFYQMSGNNISTCLLSGQWGKVSVKCKAKCGPIPI
VAQSEVMWHNRSVVIYRCVDGYHSWRGSYVSVCGSSGEWLGATLRCIEIKPPVNHLSVLN
EKCLHWRAEKYEEDEEVYKVTYVGSRDYERSFHDRGKRRLSSKADQLELCLNLLPVTNYS
ISITALSSRFTATISTNTSLTVPPAPVVYYREFETPVPTLRLRRSPNTLDTIGVYQVFVL
PVEGVVMFDCSSPVSSGISIKIKSSTEYITAQIDVGHIRTDMNFTVGDGLYYGGFFNAPL
ENGRNYYIILRAVSRWKSTLKSSCVLWAKVKGTSYVLRVSSLCAAASIGLVALVLLGGYC
FTWYGRWC
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagaaacagagcgatgatcgtggtcattctgctctttgcagaagttccagca
aaaggtcacatgctggacgtgtgtgccacctgccacgctaacgcccattgtgacgacaag
ttagacggctctggcaaagtttgtaactgcaagtacggctttgttggaaacgggataacc
tactgtcaagataaagacgagtgtcagataggtgacaataagatctgtgggcagcacacc
acctgccagaacacgtatggcagctactactgcacctgcctggctggatacagcccgtct
aacaacatgtctgtcttcatcccaaatgatggaacccactgccaggacatcgacgagtgc
agcatcgcaggctcgtgtggagcgggagctcagtgcaggaatctggagggcagttttgac
tgcagctgccagctgggacatcaagtccacaacggagtggagcccttccacccagccaga
gacaacgcttcctgcaaagtggttgactgtggcccgccggcctcagtggaggacacagag
ctgcggtcagtcacaggcaccacatacagcagtgtggccacgtttgtctgtgatgaaggc
tttgtgtggaggagtggagccaacagctctgtgtgtggagctgatggacggtgggaagga
cccaacatggtctgtgaagaggatgactgtggctctccccccgccctgcctcactctcat
gtgctgtggaataagagttcgagggtgggcaccaacgtggtttatcagtgtaactctgga
tatcataatgttggaacgggcaatgtatccatctgtacttctactggacagtgggagaga
ccgcctatgctctgccaagaggccgtgtgtggaagtcctcctgtgattgaatacactgag
caggtgtgggacagtcattcaacccctggcagcaccgtgctctatgtttgtaaagagggc
ttttattacaaaggaggactcaatatatcgatgtgtaatgaaaacgctcagtggaccccc
ccaactctgtcgtgtcaagacgtgttgtgtggggaccctcctacactgcctcacactggg
cgagtgtggaatggcagctccagccttggaagcacagtgatttacgactgtaacatagga
ttttatcacagagaaggaaataacatgtcgttgtgctcaattaatggttactggacaaaa
ccaaacatctcatgcaaagaggttgactgtggtgtgccaccgcccatcccccattcaatc
atgctgtgggatcaaatctccactttgggctctcaggtggtttatcagtgtaactctgga
tatcgccgtgtaggagagggaaacgtatccgcttgtactgcaagtggagactgggttgga
gcctctctgctctgtcaaggtactcatgacattaaactcacgcaatggagtcttgggtta
cctgacctcaggaaaggttatcatgcaatcttcatgtcggcaatattacataatttccat
gatgtagttgaactaaatgaatgttcctgttcaactgggattacaaccacaacatgtgta
cattaccctgcaatgacttgctgtcttgttgttgtagaaatcagttgtcaagagcctgtt
tttaaacctcgtgctaagacgatgtgggacggaacatcacacattggcactgtggtgcat
taccaatgtgaggaaggatattacacctctggcctgagaaactactccgtgtgtggagag
aatggactgtgggaggacattgatctctggtgtgaagaagtaagctgtggccccccacta
acactcccccatactaacctggggtgggatggcaccagtaggccgggcagcgtggtgctg
tatgagtgcgtggagggattttaccagatgagtggaaacaatatttcgacatgtttacta
tcaggacagtgggggaaagtatctgtgaagtgcaaagccaaatgtggcccgattcccatc
gttgcccaatcagaggtgatgtggcataacaggagtgttgtgatctaccgctgtgtggat
ggataccacagctggaggggcagctacgtgtctgtgtgtggcagctcaggggagtggctg
ggagctacactgagatgcatcgaaataaagccacctgtcaatcacctttctgtcctcaat
gaaaaatgtctgcattggagagcagagaagtatgaggaggatgaagaagtatacaaggtg
acatacgtcggatccagagactacgagaggtcctttcatgatagagggaagcggcgtctg
agctctaaggcagaccagctggaactgtgtctgaacctgcttccagtcacaaactacagc
atctccatcaccgcactgtcttcgcgattcactgccaccatctccactaacaccagttta
acagtgcctccagcaccagttgtctactacagagaatttgagactcctgtcccaacgttg
aggctacgaagatcccccaacacactggacacaatcggtgtgtaccaggtgtttgtgctt
cctgtcgagggcgttgtgatgtttgactgttcctctcctgtgagctcaggcatctccatc
aaaataaagtcctccacagagtacatcacggcccagattgatgtcggacatatcaggaca
gacatgaactttactgtaggagatggactctactatggaggcttctttaatgcaccactg
gagaacggcaggaactattacatcatcttacgagccgtcagtcggtggaaatcgacttta
aaaagttcctgcgtcctgtgggctaaagtaaaaggtacatcgtatgttctgagggtttca
tctctgtgtgctgctgcatccataggactggttgccttggtccttttgggtggctactgt
ttcacctggtatggaagatggtgttaa
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