Pseudoliparis swirei (Mariana hadal snailfish): 130196335
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Entry
130196335 CDS
T09868
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196335 (apba1a)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130196335 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
130196335 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130196335
NCBI-ProteinID:
XP_056274333
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All DBs
Position
7:29657751..29688450
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AA seq
894 aa
AA seq
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MNPQEMELGQEVTEEADAPPRHRHSNHGSRSRNHSNQEKRYRRVEAPAGESAGGRARVPQ
QRRPQEEGDAELQPGARAQQPIPRPAVTRYRRQGDGEARVRAQQLRHRQKQQREAEKAEN
SARQQEKQRHAEMAHEDERERDDSALARSASTESGFHTHTDRAEGDLEPDGQPEEAEDET
GNYGVQLRPEAEGYAESAEAEQQHLHLHPDYPPEAPRSEPHPEIQTPRGRRDGAEEVPNT
GSSNYVSAEPLRRSGGRADGSAGQGLESLDGAYAEPYDIYSLSEHVYEEIRNAPAPVPSA
ADGAEDAEALRQRRAGFRLLEGREGGGDYQQQEAVGSRLRHYDERSDGESDSPEKEAEFA
PYPRADSCDPEEDIDGIVAEVKESLSSQSLQHPPEDVIDEANELQPGEERPRPRQPEAQT
DPADPPEPAGPRAASPSEEVVAVRNSQEKRDAISLAIKDIKEAIEEVKTRTVRSPYTPDE
PKEPIWVMRQDLSPTAECDLQPPPGGDSPGSSGSPSPPGAEASSRRLLQDDSFKTPPSSK
ETRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNIRMMQAQEAVN
RIKTAQKLAQDRKKAPEGEPQPMTEVDLFISTKRIKVLNADSQDTMMDHPLRTISYIADI
GNIVVLMARRRMARPDSPESEEASESQGQESKRQYKMICHVFESEDAQLIAQSIGQAFSV
AYQEFLRANGINPEDLSQKEFSDLLNTQDMYNDDLVHFSKSENCKDVFIEKAKGEILGVV
IVESGWGSILPTVIIANMMHAGPAERSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKVGG
LKNQSGIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccaggagatggagctcggccaggaggtcacggaggaggccgacgcccctcct
cgccaccgccacagcaaccacggcagccggtcccgtaaccacagcaaccaggagaagcgc
taccgacgcgtcgaagcgccggctggagaaagcgccggcggccgagcgagggtgccccag
cagcgccggccgcaggaggagggagacgccgagctgcaaccgggagctcgggcccagcag
cccatcccccgacccgcggtgacacggtaccgccgacagggggacggcgaggcccgggtc
agagcccagcagctgaggcacagacagaagcagcagagggaggcggagaaagccgagaac
tcggcgcggcaacaggagaagcagcgccacgccgagatggcccatgaagacgagcgggag
cgggacgactcggcgctcgcccgctccgccagcaccgagagcggcttccacacccacacc
gaccgggccgagggcgacctggagcccgacgggcagccggaggaagcggaagacgagacg
gggaactacggagtccagctgcggccggaggcggagggatacgccgagagcgccgaggcc
gaacagcaacacctccacctgcatccggactaccctcctgaggcgccgcggagcgaaccc
caccctgagatccaaaccccccgggggagacgggacggggcagaggaggtgccgaacacc
ggctcctccaactacgtctccgccgagcccctccgccgctccggaggccgggccgacggc
tccgccggtcagggcttggagagtttagacggcgcctacgccgagccttatgacatttac
tccctctccgagcacgtctacgaggagatccgcaacgctcccgcaccggttccctctgct
gccgacggggccgaggacgcggaggcgctccgacagaggcgcgccggcttccggctgctg
gaagggcgggagggaggcggggactaccagcagcaggaagcggtgggctcccgcctgcgc
cactacgacgagcgctcggacggagagtccgacagcccggagaaggaggccgagttcgcc
ccgtacccgcgcgccgacagctgcgacccggaggaggacatcgacggcatcgtggccgag
gtcaaggaaagcctgagctctcagagtctccaacatcctccggaggacgtcatagacgaa
gcgaacgagcttcagccgggcgaggagcgaccccgacccagacagcccgaggcccaaacc
gaccccgccgacccgccggagccggccgggccgcgggccgcgagtccctcggaggaggtg
gtggcagtgaggaacagccaagagaagagggacgccatctccctggccatcaaggacatc
aaggaggccatcgaggaggtgaagaccagaacggtgagatctccgtacacgcccgatgag
cccaaggagcccatctgggtcatgaggcaggacctgagccccactgccgagtgcgacctg
cagccgccaccggggggcgattcccccggctcatcgggctcgccctcccctccgggagca
gaggcgtccagcagacgcctgctgcaggacgacagcttcaagacccccccctccagcaaa
gagaccaggagaagcctcgcgtccttccccacatacgtagaagtccccggaccatgtgac
ccggaggacctgatcgatgggatcatcttcgcagccaactacctgggctccacccagctg
ctgtcggataaaactccgtccaagaacatccgcatgatgcaggcgcaggaggccgtcaac
cgcatcaagacggcccagaaattagcccaggacaggaagaaggcccctgagggagagcct
cagcccatgacggaggtggatctcttcatctccaccaagagaatcaaagttctgaacgct
gactcccaggacaccatgatggaccaccctttgcggacgatctcctacatcgccgacatc
ggcaacatcgtggtcctgatggcccggcgccggatggcccggcccgactctccggagagc
gaggaggcctcggagtctcagggtcaagagagcaagcggcagtacaagatgatatgccac
gtgtttgagtctgaggacgcccagttgattgcccagtccatcgggcaggccttcagcgtg
gcctatcaggaattcctccgggccaacggcattaaccccgaggacctgagccagaaggag
ttcagtgacctgctcaacactcaggacatgtacaacgacgacctcgtccacttctccaag
tccgaaaactgcaaagacgtgttcatcgagaaagctaagggggagattctgggcgtggtc
atcgtggagagtgggtggggctccatcctgcccaccgtcatcatcgcgaacatgatgcac
gccgggccggcggagaggtccggcaaactgaacataggagaccagatcatgtccattaat
gggaccagtctggtgggactgccactgtccacctgccagagcatcatcaaggtagggggt
ctgaagaaccagtccgggatcaagctcaacattgtccgatgccccccagtcaccactgtc
ctcatcaggcggcctgacctgcgctaccagctgggcttcagcgtccagaatggcattatc
tgtagccttatgcgcgggggcatcgccgagcggggcgggtcgtag
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