Pseudoliparis swirei (Mariana hadal snailfish): 130196343
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Entry
130196343 CDS
T09868
Symbol
arrdc1a
Name
(RefSeq) arrestin domain-containing protein 1a
KO
K26228
arrestin domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196343 (arrdc1a)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
130196343 (arrdc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
LDB19
Vps26
Motif
Other DBs
NCBI-GeneID:
130196343
NCBI-ProteinID:
XP_056274343
LinkDB
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Position
7:31082939..31092112
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AA seq
424 aa
AA seq
DB search
MGQLLVDNSVFCFSAIKVNCNGFCGVTSKENDTAWVLEEQYFNSTVSVADKGTLKQGEHT
FPFKFLIPESAPTSFEGNFGRIVYRVRAFIDTPRFAKDYNTEKAFFLLRLLNLNQVPDIW
GTCTSAVKQQFTYMLVKTGTVVLNAQSDKKGYTPGQIIQVLVNIHNQSGKTTGNIAASLM
QRVTYEMKKPTHDVRTIAEVEGGVVKAGKESEWKEQIIVPPLPQSSLAGCDLIKIEYYVK
VSLRSPDVILMLPIHIGNVSLDEKLHPSRKAAPPSAVAAEAPPAASSSSTRSSPTVRPRP
KPAPRPNPRPRMSSHNSPSAPPVEHHQGAEGGAQGSDGFPNKRRSQLVSPNAFSYAPGLF
FSQNQQHNGPGPALREPGPRGAAAPDPTGHTASSMPTPLILPPDYGTSAYPQEAPPTYDE
SFNT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggcagctgctcgtggataactctgttttctgtttttcagccatcaaagtgaactgc
aatggattctgtggcgtcaccagcaaggagaacgacacggcgtgggtgctggaggagcag
tacttcaacagcaccgtgtcggtggcagacaaaggaaccctgaaacagggagaacacacg
tttcccttcaagttcctcataccagaatccgcaccaacatcttttgaaggcaactttggt
cgcatcgtttacagagtgagagcttttatcgacacgccgcgattcgccaaggactacaac
acggagaaagccttcttcctcctgagacttctgaacctcaaccaagtgccggacatctgg
ggaacctgcacgtctgccgtgaagcagcagttcacctacatgctggtgaagacgggcacg
gtggtcctgaatgcccagtccgacaagaagggttacacaccgggccagatcattcaggtg
ctggtcaacatccacaaccagtctgggaagaccacgggcaacatagcggccagcctcatg
cagagagttacctatgagatgaagaagcccacccatgatgttaggacgattgccgaggtg
gagggtggcgtggtgaaggccggcaaggagtccgagtggaaggagcagatcatcgttcct
cctcttcctcagtcctccctggctggttgtgatctcataaagatagaatattacgtcaaa
gtcagtctgaggtctccagacgtcatcctgatgctgcccatccacatcgggaacgtctct
ctggatgagaagctccacccttccagaaaagcagctcctccctcggcggtggcggccgaa
gctccgcccgccgcctcctcctcctccaccaggagctcgcccacggttcgtcctcgcccc
aaacccgctccccgccccaaccctcgcccccggatgtcctctcacaactcccccagcgcc
cctcccgtggagcaccaccagggggccgagggcggggctcagggcagcgacggcttcccc
aacaagcggcggtcccagctggtgtcgcccaacgccttcagctacgcccccggcctcttc
ttctcccagaaccagcagcacaatggacccggcccggccctcagagagccgggtccacgg
ggagccgccgcgcccgaccccaccgggcacaccgcgagctcgatgcccacgccgctcatc
ctgccgccggactacggcacctcggcgtatccacaagaggctcctcctacttatgacgag
agcttcaacacatga
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