Pseudoliparis swirei (Mariana hadal snailfish): 130196365
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Entry
130196365 CDS
T09868
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130196365 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130196365 (ncor2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
130196365 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4820
Motif
Other DBs
NCBI-GeneID:
130196365
NCBI-ProteinID:
XP_056274384
LinkDB
All DBs
Position
7:7801361..7884121
Genome browser
AA seq
2472 aa
AA seq
DB search
MSSHPQSVQPGRRTVDTRHLPNPASLPLQRAHTEVGLVDYHSHHARDYSSHLAQPHRRRP
SLLSEFQPGNERGQEQHIRYEHMYLPEPSGQSEVEYAEIKRPRLEMNPESLMRPSSHRPQ
LPLGAADEMAKDRGMGKLEPISPVSPVHMDPDLDLVPARFSKEELIQNMDRVDREITMVE
QQICKLRKKQQQLEEEAAKPHEPERNISPPPSEAKHRSLVQIIYDENRKKAEEAHRILEG
LGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYDQLME
AWEKKVDRIESNPRRRAKDSKVREYYEKQFPEIRKQRELQERMQSRVGQRGGGLTLSAAR
SEHEVSEIIDGISEHENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPMKVYKDRQ
VMNMWSEQEKDSFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKSENYKNIVRRNY
RRRGRSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQVQQQVQQQVH
RGSQDEKEKEEKEKEGERDEEKNEAEDKEDGMKDDTSGEDAEDKEPTVAFKGRRTANSQG
RRKGRITRSMTSEVEETTTPPLNELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAK
MVGSKTVSQCKNFYFNYKKRQKLDEILQQHKMKSEKERKARRKGKALQNEETSAPYTAEE
EEMEGSGASGNEEEAPEDGEGGANNSSDTESLPSPHSSEDSKAKEEGASRSKASSTTGDK
EVAGSDAGQAGDEKPPVKEDAESVIKQEIKTETGEPSKEQLQPTSPSDAIDKKPPTAELE
EGKSSIKSSKKDHGPRTGSHGDSDSSDTCSADEVEETDNTDKNRMTSPRPSLLNYTHDGV
ISSPLQKPLDLKQLKHRAAAIPPIIPEASMQGIQRSVGGKAVLPPHALALYQQQITMAHG
ESSQEVKLQQQQQIPGQPGKQQPYTLQADRDREALHSSSPHIRPRSPSTSDKDELEGNER
WLLTLLQGLKKSRAFSPHGEAKKQVLGPDDLRTSTVGRPVLSPYPMSPRDMAKISHDQHL
LHFNSFQQTGHPSLPNLPQDSGRLAAVRPLTMPEPPPLISSTKPGGSITQGTPVQLHSPA
HGLDHGRMTPTQMGLSWMDQRKVAGPFPVIKQEQLSPRSSSSQSDNLQSQGSPHDSAAGR
GSIPAVQGGSITKGIPGSRMHPESSISYRGGSITQGTPADVLYKGTITRLITEDSASRAE
RERDEALSKGHVVYEGISGHILTYDRPPSQTPKDEGILGLKRPYDIMEGGISRGLPLRDS
LSAANLEGLIGRAMPHDRDSPHHTSYKDAHHIRGSISQGIPRHLDPQDGYLRREPKQMKR
EGSPPRGPGSLSDPMKGRESMVPTVKEAGRSIHLIPREELRQPAKEGIMAQGTPMKQEAT
GSGKRHDVRSIIASSPRSYHNAPSHMEMRAERGRYDEVPKGRPSAVVSTSSPIARSSPLT
LGSEQGSKAHHSPVSYEDKGALRAPYPGPSHRGSPLSREASQRQHDGSSKNPPQERKSTP
TPREMSATKSPNLQGVPDQQTYERLLQGLGAADVYRQIPIAFDPASLPRGIAIDPAAYYL
PRHLAPNPAYPHPYPYLIRGFPDTTALENRQTLLNDYITSQQMHQWPAAAAMAAQRSDLL
RGLSPRDQPIPLTYSAAPRGIIDLSQVPHLPVLVPPSAGAAGSPMDRITYIPGGTATFSG
RPYTTSPISPVGPSHISKMQGASSDRERERDRERDRERERDRERDRERERERERERDRER
ERERDRERDRDRERERDREKGGSLGNVEHAPIWRPGTEHSLASSSSSSARPSSQPYSHQH
SPVSPRNQETVQQRPSVLHNTGGKSLSINDHSSSSVFRSISSGMARYQGYPGHLQRTGMP
PEAYPPVMDSNVAKEQSRDGGKNRGGLPKHLQDQHGPSSKSDPKLSCPSPGGMYPGSYPS
APGRPQHLLPPQSDNPPGRGESGTPSREKTQNKAMSIQEQELRVLGKTTMTAANFINAII
MRQISCETEMAETGSLVASSATDAQQKMEPHSLYRAPSEERLSPGQRPPSPCLKGSQRVV
TLAQHISEVITKDYTRQSQQQQQSYHGSPVLDLTRPPSASQPPPISQESVQGSRYPESLG
GERNRERSPPQPKTSPVSVSNDGIEPVSPAGASSEPEVQGGASYSEQGEQGMGSRSPPNA
AQPPAFFSKLTESTSAIVKSKKQEMIKKMTVVGNDGDFTTGQPGTEIFNMPASTTAGPVS
VRCHPAPETPGNSIGLEAIIRKALMGKYDDQAEERSPANAAGQMGSAVSAGLPVADGRAE
DFFSQGGGKSSKGSGRSNGRKAKSPGPGLSAGERPSSVSSVHSEGDCNRRTPLTNRVWED
RPSSTGSTPTPFPCNPLIMRFPSGTVSAPSPSSGQLGGPGPGPGPGPGQGRSWEEEPKPL
LMSQYETLSDSE
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcacccccagtctgtgcagccgggccggaggactgtggacacacggcacctg
ccaaacccggcgagtttaccgctgcaacgggcacacacggaagtgggactggttgactac
cactctcatcatgccagggactacagctcccacctggctcagccccatcgccgtcgaccc
tctttactttcggagttccaacctggaaatgagaggggacaagaacagcatatccgctat
gagcacatgtacctgccggagcccagcggccaatcagaggtggagtatgcggagatcaaa
aggcctcgtctagagatgaacccagagtctctgatgaggccttcatcccaccggccacaa
ttgcctctcggagcggctgatgaaatggcaaaggaccgtggaatggggaagctggagccg
atctcccctgtgagcccggtccatatggaccctgacttggatctggtgccggctcgcttc
tccaaggaggagctgatccagaacatggaccgcgtagacagggagatcaccatggtggag
cagcagatctgcaagcttcgcaaaaaacagcaacagctggaggaggaggctgcaaagcca
cacgagccagagcgaaacatctcgccaccacccagcgaggccaagcaccgcagcctggtg
cagatcatctacgacgagaacaggaaaaaggcagaagaggctcacaggatactggaggga
ctgggacccagggtagaactgcctttgtacaatcagccttctgataccaagcagtaccat
gagaacatcaaaataaaccaggcgatgaggaagaagctcatcttgtacttcaagaggaga
aatcatgctcgtaagcagtgggaacagaaattttgccagcgctatgaccagctgatggaa
gcctgggagaagaaggtggatcgcattgaaagcaatccgcggcgccgagccaaggatagc
aaggtgcgggagtactacgagaaacagttcccagagatccgcaagcaaagggagctacag
gagcgcatgcagagccgtgttgggcagagaggaggtgggctgaccttgtctgcagctcgc
agtgaacatgaggtctccgagatcattgatggaatatcagagcatgagaacacagagaaa
cagatgcggcagctggcggtcatccctccgatgcttttcgacgctgagcagcagcgcatc
aagttcatcaacatgaatggattgatggatgaccccatgaaggtgtacaaggaccggcag
gttatgaacatgtggagcgaacaggagaaggactctttcagagagaagttcatccagcac
cccaaaaactttggtctgattgcgtcttttctggagagaaagacggtggcggagtgtgtg
ctcttttactacctgaccaaaaagagtgaaaactacaagaacatagtgcggaggaactac
agacgccgaggaagaagccagcagcaacagcagcagcagcagcagcagcagcaacaacag
caacaacagcaacaacaacaacaacaacagcagcagcagcaacaacaacagcagcagcag
cagcagcaacaacaacaagtgcaacaacaagtgcaacaacaagtgcaacaacaagtgcac
cggggcagccaggatgaaaaggaaaaggaggagaaggagaaggagggagagagggatgaa
gaaaaaaatgaagctgaagacaaggaagatggaatgaaggacgacacctctggagaagat
gcagaggacaaagagcctactgtggcgtttaagggtcgacgcacagccaacagccagggg
cgccgcaagggccgaatcacccgctctatgaccagtgaagtggaggagaccaccacaccc
ccactcaatgagcttgctaatctggagatgaatgagagctctcgctggactgaagaagag
atggaaactgccaaaaaaggcctcctccagtatggtaggaattggtctgccatcgccaag
atggtgggatccaaaactgtgtcacagtgcaagaacttttacttcaactacaagaagagg
cagaaactggatgagatcctgcagcagcataaaatgaaatcggagaaagagcgaaaggcc
cgtcgtaagggcaaagccctgcagaatgaggagaccagtgccccgtatacagcagaggag
gaggagatggagggctcaggagccagtggcaatgaagaggaggcccctgaagatggagaa
ggtggagccaacaacagctctgatacggagagcttgccctcaccacactcatcagaggac
agcaaggctaaggaggaaggcgcgagcaggtcaaaggccagctccaccactggggacaag
gaggtggccgggtcagacgcgggccaggcaggggatgagaagcctccagtcaaggaagat
gcagaatcagtcatcaagcaggagataaagactgagacaggggagcccagcaaagaacaa
ctgcagccaacttcacccagcgatgccattgataaaaaacctcctactgcagagctggaa
gaaggtaaaagctccatcaagagctccaagaaggaccacgggcccagaacaggttcccat
ggggacagtgactctagtgacacgtgcagcgctgatgaagtggaggagacggacaacaca
gacaagaacagaatgacttctccgcggccaagtctcctgaactacactcatgatggggtc
atatcctcgccgctgcagaagcccctggacctgaaacagctcaaacacagggccgctgcc
ataccaccgattataccagaagcctccatgcaaggcattcagcgcagcgtaggtggcaag
gcagtgctgccccctcatgccctggcattgtaccagcaacagatcaccatggctcatggg
gagtcatctcaggaagtaaaattgcagcagcagcagcagattccaggccagccaggcaaa
cagcagccgtacaccttgcaggcagacagagacagggaggctcttcacagcagcagtcct
catatccgcccgcgcagcccctccaccagcgacaaggatgagctggaaggcaacgagagg
tggttactgaccctcctgcagggattaaaaaagtcccgggctttctccccgcacggtgaa
gccaagaagcaggtgttgggccccgatgacctgaggacctccaccgtgggccgaccagtc
ctctccccctaccccatgtccccacgagacatggccaagattagtcatgaccaacacctg
ctccacttcaactcgttccagcaaacaggccacccctcactccctaatctgccacaggac
agtggaaggctagcagcagtgaggcccctcacaatgccagagccaccaccactcatttcc
tccaccaagccaggtggctccatcacacagggcaccccagtgcagttgcacagcccagcc
catgggttggaccatggtaggatgacccccacgcagatgggtttgtcttggatggaccaa
aggaaagtggccggtccttttcctgtgataaagcaggaacagttgtcccctcgcagctcg
tcctctcaatcagataacctgcaaagccaggggtcgcctcatgatagtgctgctggacgt
ggttctattccagctgtccaggggggcagtatcacaaagggtatcccagggagcagaatg
catccagagtcctccatctcctaccgagggggctccatcactcaggggacgccagctgat
gtgctgtacaagggaaccataacccgtctgatcacagaggacagcgccagtcgagctgag
agggaacgggatgaggcactttccaaaggccacgtggtctatgagggcatcagtgggcac
attctcacatatgaccgcccaccgtctcagacccctaaagatgaaggcattctcggcctg
aagcgtccgtatgacataatggagggaggtatctcaagagggctgcccttgagggattca
ctgtctgctgccaaccttgaaggtctgattgggcgagccatgcctcatgatagggacagt
cctcaccacacatcttacaaggatgctcaccacatccgtggctccatctcacaaggtata
cctcgtcacctggaccctcaggatggctacctgaggagggagccgaagcagatgaagaga
gagggctccccaccccgtgggcccggttccctttctgacccaatgaagggcagagagtcc
atggtgcctaccgtgaaggaggctggtcgctccatccacctcattcccagggaggagctc
agacagcctgccaaggagggcatcatggcacagggaacccccatgaagcaggaggcaact
ggttcagggaaacgtcacgatgtccgctccattattgccagctcaccacgttcctaccac
aatgcaccctcccacatggagatgcgtgctgagaggggccgctacgacgaggtaccaaaa
gggcggcccagtgcggtggtcagcacatctagccctatagcccgctcttctccccttaca
ctggggtcagagcagggaagcaaagctcatcatagtccagtgagctacgaggacaaaggc
gccttaagggccccttaccccgggccttcacatcgtggctcgcctctgtccagggaggca
agccaaaggcagcatgatggttcgagtaagaatccgcctcaggagcgtaaatccacacca
accccgagggaaatgagtgccaccaaatcaccaaatctccagggtgttccagatcaacag
acctatgagcggctgctgcagggtcttggggctgcagacgtgtatcgtcaaatccccata
gccttcgaccctgcgtcgctgccccgcgggatcgccattgacccagcggcctactacttg
cctcgccacctagcgcccaacccggcgtacccccacccctacccctacctcatccgtggc
tttcctgacactacggccctggaaaaccgccagacactgctcaatgactacatcacctcc
cagcagatgcaccagtggcctgcagccgctgccatggctgcccagcgctcagacctgctg
aggggcctttctccacgagaccagcccattcctctaacctactccgcagccccgcgaggg
atcatcgatctttctcaggtgccgcacttacctgtcctggtccctccctctgcaggggca
gccggctccccaatggatcgcatcacctacatccccggaggaaccgccaccttctctggc
aggccttacaccacctcccccatctcaccagttggaccctcacacataagcaagatgcag
ggcgcatcttcagaccgtgagcgcgaaagggaccgtgagcgtgaccgagagagggagagg
gaccgggagagagaccgagagcgggaaagagagagggagcgggaacgcgaccgagagagg
gaacgggagagagaccgtgaaagggaccgagacagagaacgagagcgcgacagagagaag
ggcgggtcacttggaaatgtggagcacgcccccatctggcgaccaggtacagaacacagc
ttggcaagcagtagcagcagcagtgcgagaccttcctcccaaccgtatagccaccagcac
tccccagtgtccccccgcaaccaggagaccgtgcagcagaggccaagtgtcctgcacaac
actgggggcaaaagtctttccatcaacgatcactccagctcgtctgtgtttcggtccata
tcctcaggaatggcccgctaccaaggttatcctggccacctccaaaggacaggtatgccc
cctgaggcctacccacctgtcatggactcaaatgtagccaaagagcagagtcgcgatgga
gggaaaaacaggggcggtctacccaagcacttgcaggaccagcacgggccctccagtaaa
tctgacccaaagctgtcctgccccagcccaggaggaatgtacccaggttcctatccctcg
gctccagggcggccgcagcacctgctccctccccagtcggataaccctcctggtcgtgga
gaaagcggtacacctagtagggaaaagactcaaaacaaagcgatgtccattcaggaacaa
gagctccgagtactcggtaagaccaccatgactgcggccaacttcataaacgcgattatt
atgcgtcaaatttcttgtgaaacggagatggcagagacgggctcgcttgttgctagcagc
gccactgatgctcaacagaagatggagccacacagtctataccgtgctccgtctgaggag
agactgtctccaggccaacggcccccatccccctgccttaaaggcagccagagggtggtc
accctggcacagcacatcagtgaggtgataactaaggactacaccaggcagagccagcag
cagcagcaaagctaccacggctctcctgtcctggacttgacccgtccacccagtgcctcc
cagcccccgcccatttcacaggagtctgtccaagggtcccgatacccagagagcctcggt
ggagaacgcaacagagagcggtctcctcctcagcccaaaacatctcctgttagtgtttca
aatgatggcattgaaccagtgtctccagctggagccagttccgaacctgaggtccaggga
ggagcctcttactctgagcagggagagcaaggaatgggctcccgttcccctcccaatgcc
gcccagcctccagctttcttcagcaagttgacagagagcacctcagctatcgtcaagtcc
aagaagcaggaaatgatcaagaagatgacggtggtcggaaatgacggtgatttcactact
ggtcagccaggaacggagatcttcaatatgccggcgtctacaactgcaggacccgtgagt
gtccgctgccatccagctccagagacacctggtaactcaataggcctggaggccattata
agaaaggccttaatgggcaaatacgatgaccaggctgaggaacgctcaccagccaacgct
gccggccagatggggtcagctgtgtctgccggtctgcctgttgccgacggacgcgccgaa
gacttcttctcacaaggtgggggaaagtcgtcaaagggcagcgggcgctctaatgggcgg
aaggccaaatctccaggacccggcctgtcggcgggcgagaggccgtcctccgtttcctca
gtccactctgagggagactgcaacagacgaactcctctaactaaccgtgtctgggaggat
cggccttcgtccacaggttcaactccaactcccttcccgtgtaacccgttgataatgcgt
ttccccagcggtaccgtgtcggctccctcgccctcctctggccaactggggggaccggga
ccaggaccaggtcctggacctggacaaggtcggtcctgggaggaggagcccaagcctctg
ctcatgtctcagtacgagaccctgtctgacagcgagtga
DBGET
integrated database retrieval system
