Pseudoliparis swirei (Mariana hadal snailfish): 130196372
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Entry
130196372 CDS
T09868
Symbol
stx2b
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130196372 (stx2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196372 (stx2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130196372 (stx2b)
Membrane trafficking [BR:
pswi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130196372 (stx2b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130196372 (stx2b)
Exosomal proteins of other body fluids (saliva and urine)
130196372 (stx2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF7311
Tlp
DUF3671
Prominin
ETRAMP
T2SSF
DUF2116
DUF16
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
130196372
NCBI-ProteinID:
XP_056274406
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All DBs
Position
7:complement(7694168..7703278)
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AA seq
294 aa
AA seq
DB search
MMKDRLVELTSGTPQAEEDVAVAVDRDGFMESFFRRVEEVRGLMDKISYQVEEVRKMHSM
LLSAPHPDARTKVQLDALTNNIKGNANVVRTKLKSMENSMPKDDGANRSSVDIRIQKTQY
TVLSRKFVEVMTQYNETQVSFRERSKGRIQRQLEITGRVTTNEELEGMLESGNPSIFTSD
IISDSQITRQALSEIESRHQDIIRLESSIRELHAMFMDMAMLVETQGEMVNNIEKNVSNA
AEYICSAKEETKKAVRYQKKSRRKYIIIAFALLILLALIALIVGLSVGLTKPPV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggaccgactggtggagctgacctccggtacaccacaagcagaggaggatgtg
gcagtcgcagtggacagagatggtttcatggagagctttttcagaagggtggaagaagtc
agaggactcatggataagatctcttaccaagtggaagaggtgaggaagatgcacagcatg
ctcctgtctgcaccccacccagatgccagaacaaaggtccaactggatgcactgaccaac
aatatcaaaggcaatgccaacgtggtgcgaactaaactgaaatccatggagaacagtatg
cccaaagacgatggagctaacagatcctctgttgacatcaggatccagaaaacgcagtac
acagtgctatccaggaagtttgtggaggtcatgacccagtacaatgagactcaagtgtcc
tttcgggaaagaagcaaaggaaggatccagagacagctggagataactggaagagtgacc
accaatgaagaactagagggcatgttagaaagtggaaatccatctatcttcacatctgat
atcatttctgattcccagatcacacgtcaagccctgagtgagattgagtcccgacatcag
gacatcatacgtctggagtcgagcatcagagagctccatgcgatgttcatggacatggca
atgttggtggagactcagggcgaaatggtgaacaacatcgagaagaacgtctccaatgca
gccgaatacatttgcagtgcaaaggaagaaaccaaaaaagctgtgagataccagaaaaaa
tcccgacggaaatacattatcattgcctttgctctgttgatcctgcttgctctcattgca
ctaattgtcggcctgtctgttggactaaccaaaccacctgtatga
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