Pseudoliparis swirei (Mariana hadal snailfish): 130196380
Help
Entry
130196380 CDS
T09868
Symbol
adamts12
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 12
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130196380 (adamts12)
Peptidases and inhibitors [BR:
pswi01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
130196380 (adamts12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
ADAMTS_spacer1
TSP1_spondin
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
TSP1_CCN
SAM_decarbox
Motif
Other DBs
NCBI-GeneID:
130196380
NCBI-ProteinID:
XP_056274423
LinkDB
All DBs
Position
7:complement(23987803..24005987)
Genome browser
AA seq
1600 aa
AA seq
DB search
MRCSRERPVVFLLHVVFFTLAAAGRGELSDSFGLFSLFAGQGGLSQADVSTVHPVKATAD
GEFVSHSLAHHFGRARRDLRPLRPEGRVFYKVDHRGRSLMFNLTSNERLLSSDYVLERRN
GTAGGSEHRRPGGSASCHLLGTVEAPGMRGTAAISTCKGLRGFFSLPEGQYFIEPVQKPP
GDPAGAAEPHIVYPRVPTGRERSKRSAESKGTPSPCGVQDAPSDSVQVEKEREEWEREQQ
RGADRAQTRRLRSVSRERWVETMAVVDAKLIEYHGSDNVESYIFTIMNMVAGIFHDASIG
NAVHVILVRLILLQGDEKGLKIVHHADTTLTSFCAWQKNLNPQSDTHPAHHDVAVLITRK
DICAGRDQPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTVAHELGHSFGIYHDGQGND
CELEGRHPFIMSRQLMYDSSPLTWSSCSKEYITRFLDRGWGFCLDDRPSKRDLTTPLARL
GIRYTTHHQCQLQYGPNATFCHEVDNMCQILWCSVNGTCRSKLDSPIDGTRCGPEKWCIS
GECVIVGKLPATVNGGWGQWSTWSHCSRTCGTGVQSAERECSNPKPEFGGKYCTGERRRY
RTCNTKPCPQITPSFREMLCSEFDTVPYNNEIYQWIPVANPTSPCELHCRPVVEYFSERM
LDAVTDGTPCFMNNVSRNICVNGVCKAVGCDYGIDSNAKEDRCGVCLGDGTSCETVYKSF
DAEDGFGYVDVGVIPEGARDILVKEVVEAGNFLALRSVTSEDYFLNGKFIIQWDXKHTFS
RLYLDXNTDGEPQNQTKVKHPLMKRFSAXSSQLLIQEKNMGIKYEYSIKKTKETGNELIE
PLYRWRHGAWTDCSTTCGVGEQHQPVRCFEVDVGVVDESLCDPAGRPEDRHRKCKNMNCP
ARWWVGGWQQCAVTCGPEGVRKRTVLCVRTISGEERVLHPVECKHLLEPKPVVPCNRDVP
CGQDWAAGDWEECPVTCGGSVRSRTVTCALTPKTACRATTKPRSRSLCALQRCPNLSLRR
RPGPVPKYRRFYPPKSQPTKNPEATWAPTARATTAAPATAPVAAVAVWRKTSTEGTSTNA
FLSTTPTIPEIVDADVYEDESVFPSNVTSVQKVRKANDVEKEKVEREEEREEGSTPNVMM
YTPGYDYVVEERTTEEETGIIDLDVVKSTLLKNPLESTTPTPQIVITPTSQTSLPTMHTT
KAAAGAYPTPSTSTKTWARTTRRYPSSNPHTTARINPYSPRTHRVPLTTPVYRTVMSKAP
PSTTAWKTLTTAASPQSTVTIVKLKKPAVTPKKNGPATRAKKPSSWSKGGRSNGQSQSPE
SPMSSSVGGQSNLMTRKTVSMDVFWVVGNWSECSTTCGIGARWRTVVCSSPEDGDCASLK
RPEPARTCHLQPCATWHSGSWSKCPDSCAVAGRRHREVQCVDSQSKRPLRPFHCQDASSR
PLSTLTCPHKPCVTWSTSPWGPCSGSCGEGARERLVFCPEPHGCSATLRPNSTEACSLKP
CTHWTTEDWDECSVSCGGGQQQREVNCVSEQDFAAMPNSLCEKISKPETLRKCNMQECKT
NTGPICRKNTMSSRFCDKLKLLGRCSLRSVQRQCCVTCGS
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgttcgcgcgagcgcccggttgtctttctgctgcacgtcgtcttcttcacgttg
gccgccgccggccgcggagagctctccgactccttcggactcttctccctctttgcagga
caaggtgggctgtcccaggcggacgtgtccaccgtccacccggtgaaagccaccgctgat
ggggagttcgtctcccactccctggctcaccactttgggcgagccaggcgtgacctccga
cccctccgcccggagggacgtgtcttctacaaggtcgaccacaggggccgctctctgatg
ttcaacctgacctccaacgagcggctgctctcgagcgactacgtcctggagaggaggaac
ggcaccgccggcgggtctgagcatcgccgccccgggggaagtgcttcctgccacctcctc
ggcacggtggaggcccccggcatgcgaggaaccgccgccatcagcacctgcaagggcctg
agaggcttcttctcactgccggagggacagtactttatcgaacctgtccagaagccccct
ggtgaccccgcgggcgctgcagagccccacatcgtctatccacgggttccaacgggacgt
gagagaagcaagcgcagcgccgagtccaaagggacacccagcccctgcggagttcaagat
gctccgagcgactccgtccaggtggagaaggagagggaggagtgggagagggagcagcag
aggggggcggaccgggcccagacccgccggctgcgctcggtcagcagggagcgctgggtg
gagaccatggcggtggttgacgccaagctcatcgaatatcacggcagcgataacgtggag
tcctacattttcaccatcatgaacatggtggcagggatctttcacgacgccagcattggg
aacgccgtccacgtcatcttggttcgcctcattctactccagggagacgagaaagggttg
aagatcgttcaccacgcggacaccacgttgaccagtttctgcgcttggcagaagaacctc
aacccccagagcgacacgcacccagctcaccacgacgtggccgtgttgatcacgaggaaa
gacatctgtgctgggagggaccagccctgtgagaccctgggtctgtcccatctgtccggg
atgtgccaaccgcaccgcagctgcaacatcaacgaggactcgggattgccggtcgccttc
accgtcgctcatgaactgggccacagcttcgggatctatcacgatggtcaggggaatgac
tgcgagctggaggggaggcacccgttcatcatgtccagacagctgatgtacgacagctcg
ccgctcacctggtcctcctgctccaaagaatacatcactcgcttcctcgatcgcggctgg
ggtttctgtttggacgaccgcccctccaagagggacctcaccaccccgctggctcgcctc
ggcatccgctacaccacgcaccaccagtgccagctccagtacggccccaatgccacattc
tgccacgaggtcgacaacatgtgccagattctttggtgttcggtgaacggcacctgtcgc
tccaaactggactcgcccatagacggcacccgctgcggaccggagaagtggtgtatctca
ggagagtgtgtgattgtgggtaaactcccggcgactgtgaacggaggctggggccagtgg
agcacctggtctcactgctccaggacctgtggaactggggttcagtccgcagagcgggaa
tgcagcaaccccaaaccggagttcggaggcaagtactgcacgggggagaggaggcgctac
cggacctgcaacaccaaaccctgcccgcagattacgccgagcttccgagagatgctgtgc
agcgagtttgacaccgtgccctacaacaatgagatctaccagtggatccctgtggcgaac
ccaacgagcccctgtgagctgcactgccggccagtcgtagagtacttttcggagaggatg
ctggacgccgtgacggacggcacaccgtgcttcatgaacaacgtgtccagaaacatctgc
gtcaacggagtgtgcaaggccgtgggctgcgactacggcatcgactccaacgccaaggag
gaccgctgcggagtctgcctgggcgacggcacgagctgcgagacggtctacaagtcgttc
gacgccgaagacggcttcgggtacgtggacgtgggtgtgatacccgagggggcgcgggac
atcctggtgaaggaagtggtggaggcgggtaacttcctggctctgaggagcgtgacgtcg
gaggattacttcctcaacggcaaattcatcatccagtgggactgaaaacacaccttttca
cgactatatctggattaaaacacagatggagaacctcagaatcaaactaaagtcaaacat
ccgctgatgaaacgattctctgcataatcctcccagttgctgattcaggagaagaacatg
ggtattaagtacgagtactccatcaagaagaccaaggagacaggaaatgagctcatcgag
ccgctttacaggtggaggcacggggcgtggacggactgcagcaccacctgcggcgtaggt
gagcagcaccagcctgtgcggtgctttgaggtggacgtaggggttgtggacgagtctctt
tgtgatccggccgggcgtccagaagaccgacaccgaaaatgcaagaatatgaattgtcct
gcaaggtggtgggtgggcggctggcagcagtgtgcagtcacctgtggacccgaaggggtt
cggaaacgaacggtgctctgtgtccgtacgatctctggggaggaaagggtgcttcaccca
gtcgagtgcaaacatctgctcgaacccaaacccgtggtgccgtgcaacagggacgtgccc
tgtggacaggactgggctgctggcgactgggaggagtgccccgtcacatgcggcgggagt
gttcgctcacgcacggtcacgtgtgcgctgacgcccaagacggcgtgccgcgcgacgacc
aagcctcggtccagatccctgtgcgctttgcagcgctgccccaacttaagtcttcgtaga
cgccccgggcctgttcctaaataccggcgcttctacccaccaaagagccagcccaccaag
aatcctgaagctacctgggcacccaccgcgagggccaccacagctgcaccggcaactgcg
cccgttgctgccgtcgccgtgtggaggaaaacctccaccgaaggaacttcgaccaacgcg
ttcctttcaacaacccctactatccctgaaattgtagatgcggatgtttatgaggatgaa
agtgtcttcccatctaatgtcacctctgtgcaaaaggtcagaaaagcaaacgacgtggaa
aaggaaaaagtagagagggaggaggaaagagaggagggaagtacgcctaatgtaatgatg
tatacccccgggtatgattacgtcgttgaggagaggacaacagaggaggagacgggcatt
attgacctggacgtcgtcaagtctacattgctcaaaaatcctcttgaatcaaccacgccg
acaccacagatagtcatcactcccacttcgcaaacaagtctgccgaccatgcacacgacc
aaagcggccgccggtgcctaccccaccccgagcactagtactaaaacatgggcgaggacc
actcgccgctatccatcctccaacccccacaccaccgctcgcatcaatccatacagcccg
cggacacaccgggtacccctcactactcccgtgtaccgcacagtcatgtcaaaagctcct
ccttccacaactgcgtggaagacgctcaccactgcggcgtcaccccagtctacggtgacg
atcgttaaactgaagaagcccgcggtgacgccaaagaaaaacggccctgccactcgtgcc
aaaaagccctcttcctggtccaaaggcggccgctccaatggtcaaagccagagcccggaa
agtcccatgagcagctccgtcggtggccaaagcaacctgatgaccagaaagacagtcagc
atggatgtattctgggttgtgggaaactggagcgagtgttcgaccacatgtgggattgga
gcaagatggaggacggtagtgtgcagctcgccggaggacggggactgtgccagcctgaag
agaccggagccggcacgcacgtgtcacctgcagccctgtgccacctggcacagtggcagc
tggagcaagtgtccggattcctgcgcggtggcgggccggaggcaccgtgaggtccagtgt
gtcgattcacagagtaaacgccccctcagacctttccactgccaggacgcgtccagcaga
cccctcagcaccttgacctgcccccacaagccctgcgtgacctggagtacatcaccctgg
ggaccatgctctggcagctgtggtgaaggcgccagggagcggctggtgttctgccccgag
ccccatggctgcagcgccaccctaaggcccaacagcacagaggcgtgcagtctcaagccc
tgcactcactggacgactgaggactgggacgagtgctctgtgagttgtggtgggggtcag
cagcagcgtgaagtcaactgtgtgagtgagcaggatttcgccgcgatgccaaacagcctc
tgcgagaagatctccaaaccagaaacactcaggaagtgcaacatgcaggaatgcaagacc
aacacaggtccaatttgcaggaagaacaccatgtcctctcgcttctgtgacaagctgaag
ctgctgggtcgctgctctctcaggtcggtccaaagacagtgttgtgtcacctgtgggtca
tag
DBGET
integrated database retrieval system
