Pseudoliparis swirei (Mariana hadal snailfish): 130196384
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Entry
130196384 CDS
T09868
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
pswi04144
Endocytosis
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130196384 (cltcl1)
04142 Lysosome
130196384 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130196384 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196384 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130196384 (cltcl1)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130196384 (cltcl1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130196384 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_Vps41
TPR_COPA_B
LVIVD
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
130196384
NCBI-ProteinID:
XP_056274432
LinkDB
All DBs
Position
7:complement(24289654..24313239)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTVA
LVTDTAVFHWSMEGDSQPAKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKASTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYVTNVLQNPDLALRMAVRSNLAGA
EEIFARKFNTLFAQGTYSEAAKIAASAPKGVLRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVFL
RANVPNKVIQCFAETSQFQKIVLYAKKVGFTPEWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLMQAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDQFDIKRAVVHTHLLNPEWLVNFFGALSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLSWLESRTHDGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGKYCEKRDPHLACVAYERGECDLDLIKVCNENSLFKSEARYLVRRKDAELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINKLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRELVKEAIDSYIKAVDPSAYMEV
VNAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYDDRMHEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLGQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAAITMMS
HPTDAWKEGPFKDVIAKVANLELYYKALFFYLEYKPLFLNDLLTILSPRLDHSRAVAFFS
KVNQLEVVKPYLRSVQSHNNKSVNEALNNLLMEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLED
GRKECFAACLFASYELLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVEEFAEKVTVD
KLDEADSQRKTEEEVTEPQPIVFGQQLMLPPSPAPVAPQPAYPGYGYPAAPAGFPAQPAY
GFNM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactaccgatacggtttcaggaacatctgcagttgcagaacatgggcgtg
aacccggccaacatcgggttcagctatctgaccatggagtcggacaagttcatctgcatc
cgggagaaggtgggtgatcagaaccaggtggtgatcgtggacatgtccgaccccaccaac
cccatcaggaggcccatctccgccgacagcgccatcatgaacccggccagcaaggtcatc
gccctgaaagccgccaagacgctgcagatcttcaacatcgagatgaagagcaaggtgaag
gcgcacaccatgacggaggaggtcatgttctggaagtggatctcggtaaacaccgtcgcc
ttggtgacggacacggccgtcttccactggagcatggagggcgactcccagcccgccaaa
gtgttcgatcggcatgccagtctggccggctgtcagatcatcaactacagaacggacgag
caacagaagtggctgctgctcatcgggatctctgcacagcaaaaccgagtggtcggggcc
atgcagctgtattccgttgacaggaaagtgtcccagcccatcgagggccacgccgccgcc
ttcggggagttcaaagtggagggaaatgccaaagcctccaccctcttctgtttcgccgtg
cgctcgcaggccgggggaaagttgcacatcattgaagttggtcagccagctgcaggaaac
cagccatttgctaagaaagcagtggatgtgttcttccccccggaggcccagacggacttt
cccgtagctatgcagattgggaataagcacggcgtgatctacttgatcacgaagtacggc
tacatccacctgtacgacctggagtctggagtgtgcatctacatgaaccgcatcagtgca
gagaccatctttgtaaccgcccctcacgaagccacctcggggattatcggggtcaacaag
aaggggcaggtgttgtcggtgtgcgttgaggaggaaaacatcgtcaactacgtcaccaac
gtcctgcagaaccccgatctggccttaaggatggccgtgaggtccaacctggccggggcc
gaggagatctttgccaggaagttcaatactctgtttgcccagggaacatactcagaggcc
gcaaagattgctgcgtcggcacccaagggggtcctgcggacggcagagaccatccggaag
ttccagagcgtcccggcccagccgggccaagcctcgccgctgttgcagtacttcggtatc
ctgctggaccagggccagctcaacaagtttgagtctctggagctctgccggcccgtcctg
cagcaggggcgcaagcagctgctggagaaatggctgaaggaggacaagctggagtgctcg
gaggagctgggggacctggtgaaggcctcggacccgaccctggctctcagcgtgttcctc
agagccaacgtgcccaacaaggtcatccagtgctttgccgagaccagccagttccagaag
atcgtgctgtacgctaaaaaggtgggcttcaccccagaatgggtgtttctgctgaggaat
gtgatgcgcgtcaacccagaccagggactgcagttcgcccagatgctggtccaggacgag
gagccactggccaacatcaaccagatcgtcgacgtgttcatggagggcaacctgatccag
cagtgcacctccttcctgctggatgccctgaagaacaaccggccggccgagggacacctg
cagacgcgtctgctcgagatgaacctcatgcaagccccccaggtagcagatgcgatcttg
ggcaaccagatgttcacccactatgaccgcgcccacattgcccagctgtgcgagaaggcg
gggctgctgcaaagggctctggagcacttcaccgaccagttcgacatcaagcgagccgtg
gtgcacacgcacctgctcaaccccgagtggctggtgaacttcttcggcgctctgtcggtg
gaggactcgctggagtgtctgagggccatgttgtcggccaacatccggcagaacctgcag
ctgtgcgtccaggtggcgtccaagtatcacgagcagctgggcactcagtcgttagtggag
ctcttcgagtccttcaagagctacgagggcttgttttacttccttgggtcgattgtgaat
ttcagtcaggagcccgacgtccacttcaagtacatccaggccgcctgcaaaacaggccag
atcaaggaggtggagaggatctgcagggagagcaactgctacgacccggagagggtgaaa
aacttcctgaaggaggccaagctcacggaccagcttcccctcatcatcgtgtgcgatcgc
ttcgacttcgtccacgacctggtgctctacctctaccgcaacagcctgcagaaatacatc
gaaatctacgtgcagaaagtgaaccccagtcgtctgccggtggtgatcggcggtctgctg
gatgtggactgtgccgaggacgtcatcaagaacctgatcatggtggtcagagggcagttc
tccaccgacgagctggtggaggaggtggagaagaggaacaggttgaaactcctgctgtcg
tggctggagtctcgcacccacgacggctgcgaggagccggccacccacaacgccctggcc
aagatctacatcgacagcaacaacacgcccgagcgcttcctgaaggagaacacgttctac
gacagcgccgtggtcgggaagtactgcgagaagagggatccgcacctggcctgcgtggcc
tacgagaggggagagtgtgacctggatctcattaaggtgtgcaacgagaactctttgttc
aagagcgaggctcgctatctggtgcgacggaaagatgcagagctctgggcgaacgtgctg
gaggaaaacaaccccttcagaaggcaactcatcgaccaggtggtgcagaccgcgctgtcg
gagactcaggatccagaggaggtgtccgtcacagtcaaggccttcatgaccgcggacctg
cccaacgagctgatcgaactgctggagaagatcgtactcgacaactccgtcttcagtgaa
cacagaaacctccagaacctgctcattctgacggccatcaaggccgaccgcactcgcgtg
atggagtacatcaacaagctggacaactatgacgctccggacattgcgaacatcgcgatc
agcaacgagctctttgaggaagccttcgccattttcaagaagtttgacgtcaacacctca
gccatacaggtgttgatcgagcacatcgggaacttggaccgcgcctacgagttcgccgag
cgctgcaacgagccggcggtgtggagccagttggcccgagcgcagctgcagagggagctg
gtgaaggaggccatcgactcgtacatcaaagccgtcgacccgtcggcgtacatggaggtg
gtcaacgcggccagcaagaacgataactgggaagacttggtcaaattcctccagatggcg
cgtaagaaagcgcgagagtcgtacgtggagacggagctgatcttcgccttggcgaagacg
aaccgcctggccgagctggaggagtttgtcagcgggcccaacaacgctcacatccagcag
gtgggcgaccgctgttatgacgacaggatgcacgaggcggccaagctcttgtacaacaac
gtgtccaactttgctcgcctcgcgtcgacgctggtccacctcggggaataccaggcggcc
gtggacagcgctcggaaagccaacagcacgcggacatggaaggaggtgtgcttcgcgtgc
gtggacggcgaggagtttcggctgggacagatctgcggcctccacatcgtgatccacgcc
gacgagctggaggacctgatcagctactatcaggaccgcgggtacttcgaggagctcatc
gccctgctggaggccgcgctgggtctggagcgggcccacatgggcatgttcaccgagctc
gccatcctctactccaagttcaaaccgcagaagatgagggagcacctggaactcttctgg
tccagagtcaacatcccaaaggtccttcgtgccgcagagcagtctcatttatgggcagag
ctggttttcctctacgataaatacgaggagtttgacaacgccgccatcacgatgatgtct
cacccgacggatgcgtggaaagaagggccgttcaaggacgtcatcgccaaggtcgccaat
ctggagttgtactacaaagctctatttttctacctggaatacaaaccgctcttcctgaac
gacctgctgaccatcctgtccccgcggctggaccacagccgagccgtcgccttcttcagc
aaggtgaaccagctggaggtggtcaagccttacctgaggtccgtgcagagtcacaacaac
aagtcggtcaacgaagccctcaacaacctgctgatggaggaggaagactaccagggcctg
agagcatccatcgacgcctatgacaacttcgacaccattggcctggcgcagaggctggag
aaacacgagctgattgagttccgacgtatcgccgcttacctttacaagggcaacaaccgc
tggagacagagcgtggagctctgcaagaaggacaagctctacaaggacgccatgctctac
gccgccgagtctaaggatgccgagctggcggagactctgctccagtggttcctggaggat
ggccggaaggagtgcttcgccgcctgcctgttcgcctcctacgaactgctgcaccccgac
gtggtgctggagctggcctggaggcacaacatcatggacttcgccatgccgtacttcatc
caggtcatgagggagtacctgaccaaggttgaagagtttgcagagaaggtgacggtggac
aagctggacgaggcagacagccaaaggaaaactgaagaggaggtgacggagcctcagccg
atagtgtttggtcaacagctgatgttgcccccctctcccgctcctgtggctccccagccg
gcgtaccccggctatggctaccccgccgcccccgcaggcttcccggctcagcccgcgtac
ggcttcaacatgtaa
DBGET
integrated database retrieval system
