Pseudoliparis swirei (Mariana hadal snailfish): 130196389
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Entry
130196389 CDS
T09868
Name
(RefSeq) junction-mediating and -regulatory protein-like
KO
K24045
junction-mediating and -regulatory protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196389
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
Others
130196389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Voldacs
Motif
Other DBs
NCBI-GeneID:
130196389
NCBI-ProteinID:
XP_056274437
LinkDB
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Position
7:complement(1524500..1542905)
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AA seq
875 aa
AA seq
DB search
MSFTMEDSVESGWVAVRPNAFEEREKHKFVFIVAWNEVEGKFAITCHNRTAQRKSFGIKD
PAAQDGDETKWPESHVRDKVSQSPSKGAKEAVVKGCSTKSKAVTTTTSNPVDMKAAASPV
SPGDHEVLRSLRGDLSPPALDSLDLEELDLLSREDCSWAGLFSFQDLRSIHQQLCSVHSD
LEPCLPVFPEEPAGMWTVLFGRAEVPETEVDELCYRVQLYLGHALDTCGWKILSQVLFTE
NDDPEEYYESLSELRRSGYQEALSRATIHLQELLEKHKTVDSMVELLELYKEEDEAYAGL
LEASTQLYQYLLQPFRDMRELAMLRRQQIKISMENDYLGPRRIEALKKEDVDWQKKAQEA
VLNIQEFTIKYFEITARAQKGVYERMKVDQRKFGKSSWTVAVERMERLRYSVAKETLQLQ
RAREISLEQRKRTLREEMQSLCSSNDAMALLDHMETQYYEHQLQLYHIQAEILQCEELLL
TAQLDSIRRQMSEFQDELVYYDTFESADDIKEDNAAEREELRRLQVSARQLEARRGRITA
KRSYLRNKREICVSNHTQKQQTRQTVHKDSRPHQLKYEEEEDEDKKNRRAGQERQRTLDR
LRTFKQRYPGQVILKSIRLRVAHTRRRERGRSMDGSSVSEREGPGPLRCLSTSVQTDPSS
TLTTQPVTLLTASRPPVPAPGPADSSCSSCSLSSLLASPIYCPPPPPPPPPPLLPIKEEL
LPSRKVEEKNSAEEFPFSPLGPFIPRFFDSSQLLNARKKLRKTPESDSHSRRVSLPMDEV
LASLKRGSYHLKRVDQRPPLHSTDDDESCSILAQIRKGVKLRRVPKNERKDNGELPVSTD
PLTRSIYEALRRIKEASPDSDSDDDDGLDAHDWES
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttacaatggaggacagtgtggagtcgggatgggtggccgtccggccgaatgcg
tttgaggagagggaaaagcataaatttgtttttatcgttgcctggaatgaagtggagggt
aaatttgccattacgtgtcacaacaggacggcgcagaggaaaagctttggcataaaggac
ccggcggcgcaggatggggacgaaacaaaatggcccgaaagtcacgtcagagataaagta
tctcagagccctagcaaaggagccaaggaggctgtggttaaaggctgcagcactaagtcc
aaggcggtcacaaccaccacatctaatcctgtcgacatgaaggctgcagcgtctcccgtc
agtcccggtgatcacgaggtgttgcgctccctaagaggggacctctcgccccccgcgctg
gacagcctggacctggaggaactggacctcctgagcagggaggactgcagctgggccgga
ctcttctccttccaggacctgcggtcaattcaccagcagctgtgctcggtccactcggac
ctggagccctgcctcccggtgtttccggaggaacccgccgggatgtggacggtgctgttc
ggccgagccgaagtaccggagaccgaggtggatgagctttgctaccgtgtacagttgtac
ttgggccacgcgctcgatacgtgcggatggaagatcctttcgcaggttctgttcacggaa
aacgacgacccagaggagtactacgagagcctgagcgagctgaggcggtccgggtaccag
gaggcgctcagccgtgcaaccatacacctgcaggagctgctggagaagcacaagaccgtg
gacagcatggtggagctgttggagctgtataaggaggaagacgaggcctatgcagggctg
ctggaggcctccacacagctgtaccagtacctgctgcagcccttcagagacatgagggaa
ctagcaatgctccgcagacagcagatcaagatttccatggagaacgactacttgggccca
aggaggattgaagctctaaaaaaagaggacgttgactggcagaagaaagctcaagaagca
gtcctcaacatccaggagttcacgataaaatactttgagatcactgccagagcccagaaa
ggggtgtatgagcgtatgaaggtggaccagcgtaagtttggtaagtcttcatggacggtg
gcggtggagcgcatggagaggctccgctactccgtcgccaaggaaacgctgcagctccag
agggccagggagatcagtctggagcagaggaagcgcacacttcgagaggagatgcagagt
ctgtgcagcagtaacgacgccatggccctcttagaccacatggagacgcagtactatgag
caccagctgcagctgtaccacatccaggctgagatcctgcagtgtgaagagctgctcctc
accgcgcagctggacagcatccgcagacagatgtcagaatttcaggatgagttggtgtac
tatgacacctttgaaagtgcagacgacataaaagaggacaacgctgccgagagagaagag
ctgcgcagacttcaggtcagcgctcgccagctggaggcgaggagagggcgcatcacggcc
aagcgctcctacctgaggaacaaaagggagatctgtgtatccaaccacactcagaaacag
cagacacggcaaaccgtccacaaggactccagaccccaccagctgaaatacgaagaagag
gaagacgaggacaaaaagaatcgcagagctggtcaggagaggcagaggactctagaccga
ctacgcactttcaagcagcggtacccgggtcaggtgatcctgaagtccattcgactacgt
gtggcccacaccagaagaagagagcgtggaaggagcatggacggcagcagtgtgagcgag
agggaggggccgggccccctgcggtgcctcagtaccagtgtgcagacggaccccagctcc
acgctcaccactcagcccgtcactctcctcacagcatcccgtcctcccgtgcctgcgccc
ggtcctgcagactcctcctgctcttcctgctccctgtcctcgctactggcgtccccgata
tactgtcctcctccccctccccctccccctccccctctcctgccaattaaggaagagctc
ctgccttcgcggaaggttgaggaaaagaattcggcagaggaattccccttctcccccctc
ggtccattcatccctcgcttctttgacagtagccaactgttgaacgcccggaaaaagctg
aggaagactccagagtctgactctcacagcagaagagtgagcttgcccatggacgaggtg
ctggcctccctgaagagaggcagctaccacctgaagagggtggaccagcggcctccgctg
cactccacggacgacgacgaatcctgcagcatcctggctcagatccgaaagggggtcaaa
ctgaggcgtgtccccaagaacgaaagaaaagacaacggagagctgccggtctccaccgac
ccgctgaccaggagcatctacgaggcgctgcgccgcatcaaggaggcctcgccggattca
gactccgacgacgacgacgggctggacgcccatgactgggaaagctag
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