Pseudoliparis swirei (Mariana hadal snailfish): 130196395
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Entry
130196395 CDS
T09868
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi02010
ABC transporters
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130196395 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130196395 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130196395 (abca2)
Transporters [BR:
pswi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130196395 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
130196395
NCBI-ProteinID:
XP_056274461
LinkDB
All DBs
Position
7:complement(30290705..30333021)
Genome browser
AA seq
2363 aa
AA seq
DB search
MGFLHQLHLLLWKNISLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAITVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERISEVVEQNRLFASERPGMGQEL
ETLQQHLESLSSARKPVAYNLNSSQGFTLASVLKNQSVFHQFLVQNLSLSDSTSSLLLTT
PVSLRELDSLVFGSSPSDGGGAQRWIQGAKDSGQKAGDNIGHLEGFLLTGAMLEVLTCGG
GGATELSKILLVPEKQRPALQAYRSAVCSGGEGQRAERFRQMSLELRQQVDTQIVSEQLH
LDRPRSLAPLSQADLGLLLKDLAEVERLLRDVDLLTGLARLLPKGACTGRTPAAPANTSW
PLNATTWGPNTTDTPREEAGAEGGGGAGGRKVKEEAENPHSQFSAFVQLWAGLQPILCGH
NRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQMDKVIQKANETF
AFVGNVTHYTHVWLNISAQLRTFLEEGRLHNHLVWLQQLSSELQQHPELLNGTDSVLLQG
LMEGNYSLPTISTLLEQLDTIDNAACGWTRFMSKVSVDVFKGFPDEDSIVNYTLNQAYRD
NVSVFASVIVQMNKDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGF
VWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLLH
SDPFIIWLFLTIYAVATIMFCFLVSVVYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTISQSPVEGDDFNLGLSMMML
IIDAAVYGVLTWYIEAVHPGMYGLPRPWYFPLQRSYWSGSGRVETWDWPWCGGGAARLSV
MEEDQACAMDQRRSEEMRGMEEEPSHLSLVVCIDKLTKVYKTGSKLALDNLSLNLHENQV
VSFLGHNGAGKTTAMSILTGLFPPTSGSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKL
SVEEHLWFYSRLKGMAEEDIRKEMDKMIVDLDLSNKRHSLVQTLSGGMKRKLSVAIAFVG
GSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKL
KCCGSPLFLKSTYGDGYKLTLVKKQSEGRAQGSQLSPSSSLSPCSEARVTQFIRQFVASC
LLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDRLALTSYGVMDTTLEEVFLKVSEE
DQSLENSDAGDAEDPSAPEPEALEGQSSVKLEGWWLKLSQFHGLIVKRFHCAKRNTKGLF
SQILLPAFFVCVAMTVALSVPEIGDSPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSK
GSPDAGPQKIINSLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMC
LDSFTQGVPLSNFVPPPPSPAPSDDPDPRFEDGLWNFTVAPPTTVHEPVTSPPTLPLSIR
EPVRCTCSLQGTGFSCPSGVGGRPPLMKVVTGDILVDVTGRNVSEYLLFTSDRLRLHRYG
GLTVGNIQKSIPASFGRKIPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANL
PASKGNPAAYGFTLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVA
EKSTKAKHLQFVSGCDPVIYWLANYIWDMMNYLVPATCCVIILFVFDLPAYTSSTNFPAV
LSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLK
KINSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAM
TIEGFVGFLITILCQYNFLRKPPRVPVSCQPIDDDDVDVACERRRVLRGDADNDMLKIEN
LTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTSSFKMLTGDECTTGGDAFIA
GNSILKDLLRVQQSIGYCPQFDALFDDLTAREHLELYTRLRGIPWKDQGRVVQWALKKLE
LSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDVIKT
GRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKSISNVKE
VVRFFNRNFPEAVLKERHSTKLQFQLKSERISLAQVFSKMEQVVEVLGIEEYSVSQTTLD
NVFVNFAKKQSDNLEQQQQVSPPAGGQSPLQRILSLLKARPANTELSALMSDEPEELESD
DDEGLISFEEERVQLSFNTDTLC
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgcaccagctccatctcctgctgtggaagaacatctctctgaagaggagg
ggcccgtgggtgctggcctttgagatcttcatcccactggtcctcttcttcatcctcctg
ggtctgaggcagaagaagccagcgatcactgtgaaggaagccttctacagtgccgcccct
ctcacctcagctggcatcattcccatcatgcagtctctgtgcccggacggacagagggac
gagttcggcttcctgcagtacaagaactccactgtgacccagctgctggagcggatcagt
gaagtggtggaacagaaccgcctcttcgcgtccgagcggccggggatgggtcaggagctg
gagaccctgcagcagcacctggagagcctgagttcagcccggaaacctgtggcctacaac
ctcaactccagtcaaggcttcacgctggccagtgttctgaagaaccagtcggttttccat
cagtttctggtccagaacctttcactgtccgactccacgagcagcctgctgctcaccact
ccagtcagcctccgagagctggacagtcttgtctttggttcatctcccagcgatggagga
ggagctcaacgttggattcagggggcaaaagacagcggacaaaaagcaggagacaacatc
ggtcacctggaggggttccttctgactggagccatgctggaggtcctcacctgtggtggg
ggcggggccacggagctcagtaagatcctgttggtgcctgagaagcagcggccggcgctg
caggcctatcgcagcgcagtgtgcagcggaggggaaggtcaaagggcagaacgcttcagg
cagatgagcctcgagttgcgacagcaggtcgacacccagatcgtcagtgagcagctccac
ttggaccggccccgctctctggccccgctctctcaggccgacctggggctcttgttgaag
gacctggcggaggtggagcggctcctgagggacgtggacctgctcacgggtctggcccgg
ctgctgcccaaaggggcgtgtaccgggcggactccagccgcccccgccaacaccagctgg
cccctgaacgccaccacctggggccccaacaccacggacacccccagagaggaggccgga
gcagagggaggtggaggagcaggaggaaggaaagtgaaggaggaggcggagaaccctcac
tctcagttctcagcatttgtacagctgtgggccggactccagcccatcctgtgtgggcac
aacaggatcatcgagccagaggctttgaaacaggggaacatgagttctctgggatttacc
agcaaagaacagaggaatctgggcttactggttcacctgatgacgacaaatcccaagatc
ctctactcgcccattggttcccagatggataaagtgattcagaaggcaaatgagacattt
gccttcgtgggcaacgtgacgcactacacccacgtgtggctcaacatctccgctcagctc
aggacctttctggaggagggccggctgcacaaccacctggtgtggcttcagcagctgtca
tcggagcttcagcagcaccccgagttgttaaatggcacagacagtgtgctgctgcagggt
ctgatggagggtaactacagccttccaaccatctccaccctgctggagcagctggacacc
atcgacaatgctgcctgtggctggacgcgcttcatgtctaaggtcagtgtggacgtcttc
aagggctttcctgacgaggacagcattgtcaactacaccctgaaccaggcctaccgggac
aacgtgtctgtgtttgccagtgtgattgtccagatgaacaaagatggctccctgccgcca
catgttctgtacaagattagacaaaactccagctttacagagaagaccaacgagatccga
cgggcctactggcgtcccgggcccaacaccgggggcaaattctacttcctctacggtttt
gtttggatccaagatatgatcgagcgagccatcatcaacacgttcgtgggccacgatgtg
gtggagcccgggaactacgtccagatgttcccctacccctgttacaccagagacgacttc
ctctttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtttactccgtg
gccatgatgatccagcacatcgtggcggagaaggagcaccggctcaaagaggtgatgaag
atgatgggtctgaacaacgccgtccactgggtggcgtggttcatcaccggcttcgtccag
ctgtccatttccgtcaccgccctgacggccatcttgaagtacggcaaggtgttgctccac
agcgaccccttcatcatctggctcttcctcaccatctacgctgtggccaccatcatgttc
tgtttcttggtgtcggtggtctactcgaaggccaagctggcttccgcctgcggaggaatc
atctacttcctcagctacgtgccctacatgtatgtggccattcgggaggaggtggcccac
gataagatcactgcctttgagaagtgcatcgcgtctctgatgtccaccacggcattcgga
ctcggctccaagtactttgctctgtacgaggtcgcaggtgtcggcatccagtggaggacc
atcagccagtcgccggtcgaaggcgacgacttcaacctgggtctgtccatgatgatgctc
atcatcgacgccgctgtgtatggcgtgctcacctggtacatagaggctgtgcatccagga
atgtatgggcttccccgtccgtggtacttccccttgcagaggtcctattggtcgggcagt
gggcgtgtcgagacctgggattggccgtggtgtggaggcggggctgccaggctcagtgtg
atggaggaggatcaagcttgtgctatggaccagcgcagatcagaggagatgcggggcatg
gaggaggagcccagccacctgtcgttggtggtttgtatcgacaaactgaccaaggtgtac
aagaccggcagcaaacttgccctcgacaacctgagcctcaacctgcatgaaaaccaggtt
gtctccttcctgggacacaacggcgctggcaagaccacagccatgtccatcctgacaggc
ctgttcccgcccacctccggctctgccaccatatatggtcacgacatccgcacggagatg
gagcggatccgtcagaacctgggcatgtgtccacagcacaacgtcctgttcgacaagctg
agtgtggaggagcacctgtggttctactccagactcaaaggcatggctgaggaagacata
cgcaaggagatggacaagatgattgttgacctggatttgtcgaacaagcgccacagcctg
gtgcagactctgtccggcgggatgaagaggaagctatccgtggccatcgccttcgttggg
ggctccagggctgtgatcctggacgaacccacagcaggggtggacccctacgctcgcagg
gccatctgggacctgatcctcaagtacaaacagggtcgtaccatcctgctgtccacccac
catatggatgaagcagaccttctgggcgatcgcatcgccatcatctcccacgggaagctg
aagtgctgtggctcgcctctgttcctgaagagcacctacggagacgggtacaaactgaca
ctcgtcaaaaagcagagtgaaggcagagcacagggcagccagctgtctccgtcctcctct
ctgtctccctgctcagaagctcgggtcacacagttcatccgccagttcgtggcgtcgtgc
ctcttggtgtccgactccaacaccgagctgtcctacgtcctgccttctgaggccgtgaag
aagggctgcttcgagaggctgttccaggctttggagcagagcttggaccgcctggcgctg
accagctacggggtgatggacaccaccctggaggaggtcttcctcaaagtgtctgaggag
gaccagtctctggagaacagtgacgctggagatgcagaggacccgtcggccccggagccg
gaggccctggaggggcagagcagcgtgaagctggagggctggtggttgaagctcagtcag
ttccacggcctcatcgtcaagaggttccactgcgccaagaggaacaccaagggcctcttc
tcccagatcctcctgccggccttcttcgtctgcgtggccatgaccgtggccttgtctgtg
ccggagatcggagattcgccgcctctgatcttgtccccttctcagtatcataactacacc
caaccccggggcaacttcatcccctacgccaacgaagacagaccccagtacaggagtaag
gggtccccagacgccggcccacagaagatcatcaacagcctccgcctgccctcgggcgtg
ggtgctacctgtgtccttaaaacccccttcaacagcaccctggaccagctggcccagacc
ctcaaccccagcgccaacaactccaagaccctggctgctcgctactttgactccatgtgt
ctggactccttcacccagggggtccctctctccaacttcgtaccccctcctccttcaccg
gcaccatcggatgacccggaccctcgctttgaggacggactgtggaacttcacagtggcc
cctccaaccacagtccatgagccggtgacctctcctcccacactccccctgtccatccgt
gagccggtgcgctgcacctgctccctgcaggggacgggcttctcctgccccagtggcgtg
ggaggtcgcccccccctcatgaaggtggtcacgggggacatcctggtggacgtcacaggg
cggaacgtctccgagtacctgctcttcacctcagacagactgcgcctgcacagatatggc
ggtttaacggtggggaacatccagaaatcaatcccagcatcctttgggaggaagatacct
ccaatggttcgtaagatagcggttcggcgatccgctcaggtcctgttcaacaacaaaggg
taccacagcatgcccacctacctgaacgtcctcaacaacgccatcctgagggccaacctg
ccggcctccaagggaaaccccgctgcttacggtttcactctgaccaaccacccgatgaac
agaaccagcgccagcctctcgttggactacctgctccagggtaccgatgtagtgattgcc
atcttcatcatcgtggccatgtcctttgtgcctgccagcttcgtggtgttcctggtcgcg
gagaaatccacgaaggccaaacacctgcagttcgtgagcggctgtgaccccgtcatctac
tggctggccaactacatctgggacatgatgaactacctggttccggccacatgctgtgtt
attattctgtttgtgttcgacctgccggcctacacctcctcaaccaacttccctgctgtg
ctctccctcttccttctgtacgggtggtccatcactcccatcatgtacccagcatccttc
tggttcgaggtgcccagtacagcctacgtcttcctcatcgtcatcaacctgttcatcggc
atcactgccactgttgccaccttcctcctccagctctttgagcacgataaggatctgaaa
aagatcaacagttacctgaagtcctgtttcctcatcttccccaactacaacctgggccat
ggcctgatggagatggcttacaatgagtacatcaatgaatactacgctaaaataggccag
ttcgacaagatgaagtctccgttcgagtgggacatcgtgactcgaggactcgtcgccatg
acgatcgaaggcttcgtcggcttcctcatcaccatcctgtgccagtacaacttcctcagg
aaacccccgagggtgccagtcagctgccagcctatcgacgatgacgatgtcgacgtggcc
tgtgagagacgaagagtgctgcgaggagacgccgacaacgacatgctgaagatcgagaac
ctcacgaaggtttacaaatccaggaagatgggtcgcatcctggccgtggaccggctgtgc
ctgggcgtccggcccggggagtgctttggacttctcggggttaacggagccgggaagacc
agcagcttcaagatgctgacgggggacgagtgcaccaccggaggagatgccttcatcgcc
gggaacagcatcctgaaggacctgctccgcgtgcagcagagtatcggctactgtcctcag
ttcgacgctctgtttgacgacttgacggccagagaacatctggagctctacactcgcctc
cgtggcattccttggaaagaccaggggagggtggtgcagtgggctttaaagaagctggag
ttgtcaaagtatgccgacaagccggccggcacgtacagcggaggaaacaagcgcaagctc
tccacggccatcgctctgatcggctacccctcactcatcttcctggatgagcccaccacc
ggcatggacccaaaggcccggaggttcctctggaacttgatcctggacgtcatcaagacc
ggccgctccgtggtgctgacgtcacacagcatggaggagtgtgaggctctgtgcaccagg
ctgggcatcatggtgaacggcaggttcaagtgcctgggcagcatccagcacctgaagaac
aggtttggggatggctacatgatcacagtgaggacaaagagcatctccaatgtgaaggag
gtggtccgcttcttcaacaggaacttccctgaggccgtgctgaaggagcggcacagcacc
aagctccagttccagctgaagtccgagcgcatctccctggcgcaggtgttcagtaagatg
gagcaggtggtggaggtcctgggcatcgaggagtactccgtcagccagaccacgctggac
aacgtgttcgtcaacttcgccaagaagcagagcgacaacctggagcagcagcagcaggtg
tcgccccctgctggagggcagtcgcccctgcagcgcatcctcagcctgctgaaggctcgg
ccggccaacacggagctcagtgcgctgatgagcgacgagcccgaggagctggagagcgac
gatgacgagggtctcatcagcttcgaagaggaacgagtgcagctctccttcaacacagac
acgctctgttga
DBGET
integrated database retrieval system
