Pseudoliparis swirei (Mariana hadal snailfish): 130196397
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Entry
130196397 CDS
T09868
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03320
PPAR signaling pathway
pswi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130196397 (rxrba)
03320 PPAR signaling pathway
130196397 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196397 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130196397 (rxrba)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130196397 (rxrba)
Nuclear receptors [BR:
pswi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130196397 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
130196397
NCBI-ProteinID:
XP_056274468
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All DBs
Position
1:2008199..2031623
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AA seq
470 aa
AA seq
DB search
MGDSRDSHSPDSSSVSSPPSGQRSPPLVPSPAASMTSPPPVTTSGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLQQMSPRSPGPM
LSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKVCMVDKRQRNRCQ
YCRYQKCLANGMKREVAKMNDRSVQEERQRNREREGEAESTSVVNEEMPVEKILEAEMAV
EHKTELHTDEGSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELALDDQVILLRAG
WNELLIASFSHRSISVKDGILLATGLHVHRSSAHSAGVGAIFDRAHNAEVGAIFDRVLTE
LVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVEQLRERVYASLESFCKQKYPNQQ
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtagagattcccacagcccggacagctcgtccgtctcctcccctccgtcg
gggcagcgctcgcctccgctggttccctcgcccgcggcgtccatgacctcgccgcctccc
gtcaccaccagcggggtcaacagccccatcagcagcatcggctcgcccttctccgtcatc
agctcttcgctgggctcgccctgcctccccggcacgccgtcggtgggctacggccccatc
agcagcccgcagatcaactccaccgtgtccatgtccgggctccacgcggtgagcagctcc
gatgacgtgaagcccccgttgggcttgcagcagatgtctccccggagtccggggccgatg
ctttcccagaagcgcctctgttccatctgcggagaccgatcttctggtaagcactacggc
gtctacagctgtgagggctgtaaaggcttcttcaagaggacggtgcgcaaagacctgagc
tacacctgccgggacagcaaagtgtgcatggtggacaagaggcagaggaaccgctgccag
tactgccgctaccagaagtgcctggccaacggcatgaagagagaagtggccaagatgaac
gacagatccgtccaagaggagcgtcagaggaaccgggagcgggaaggcgaggcggagtcg
accagcgtggtgaacgaggagatgcccgtggagaagatcctggaggcggagatggccgtg
gagcacaagacggagctccacacggacgaaggctccgggggcagctctcccaacgatccc
gtcaccaacatctgccaggcggccgacaagcagctgttcacgctggtggagtgggcgaag
aggatccctcacttctccgagctggccctggacgaccaggtcatcctgctgcgagcaggc
tggaacgagctcctgatcgcgtcgttctcccatcgctccatctccgtgaaggacggcatc
ctgctggccaccggcctgcacgtccacaggagcagcgctcacagtgccggcgtgggggcc
atctttgacagggcgcacaatgccgaggttggggccatatttgacagggtgctgacggag
ctggtgagcaagatgagggacatgcagatggacaagacggagctgggctgcctgcgggcc
atcatcctcttcaacccggacgctaaaggtttgtccagccccagcgaggtggagcagctg
agagagagggtgtacgcctcgctcgagtccttctgcaagcagaagtaccccaatcagcag
ggcaggtttgctaagctcctcctccggctgccggcgctgcgctccattggtctgaagtgc
ctggagcacctgttcttcttcaagctgatcggcgacacgcccattgacaccttcctgatg
gagatgctggaggccccccaccagctcacctag
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