Pseudoliparis swirei (Mariana hadal snailfish): 130196420
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Entry
130196420 CDS
T09868
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130196420
04330 Notch signaling pathway
130196420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130196420
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
130196420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
HALZ
WD40_RFWD3
COG3_N
DUF7165
Motif
Other DBs
NCBI-GeneID:
130196420
NCBI-ProteinID:
XP_056274520
LinkDB
All DBs
Position
7:20288250..20306198
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AA seq
772 aa
AA seq
DB search
MFPQGRHPAPGQPFKFTIPESLDRIKEEFQFLQAQYHSLKMECEKLASEKTEMQRHYVMY
YEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVVQAVERAKQVTMAELNAVIG
VRGLPGLPPTQQHLSGAPVPLTPHPAGLHPSQLGGSAGLLALSGGLGALPPHMLGKDVGD
KKPHMSGPDAHSSGPEHLREREPGTSHSLLPESLRNSDKRRNGPEFSNDTKKRKVDDKDS
SHYDSDGEKSDDNLVVDVSNEDPASPRGTPLPSPRENGLDKARLLKKDPCSPASTASSAS
SSSLKSKEMTMRDKAGTPGLKSSTPTPRGDSTPGPSSTPGIRPSLSKPPSMEIPHPPTAG
LRTPLAVPGPYPGAFGMLPHAPGMNGDLASAAGAAAYAAGLHNMSPQMSVAAAAAVAAYG
RSPMVGFDPHSHMRVPGMTGIPGGKPAYSFHVAADGQMQPVPFPPDALVGPGIPRHARQI
NTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCCL
LPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI
AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS
QIFSLGYCPTGEWLAVGMESSNVEVLHVTKPDKYQLHLHESCVLSLQFASCGKWFVSTGK
DNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtttccccaggggcgacacccggctccaggccagcccttcaagttcaccatcccagaa
tcactggaccgcatcaaggaggagttccagtttcttcaggcacagtaccacagcctcaag
atggagtgtgagaagctggccagcgaaaagacagaaatgcagagacactacgtcatgtac
tacgagatgtcttatggcctcaacatcgaaatgcacaaacagactgagattgccaagaga
ctaaacaccatctgtgcacaagtcattcctttcctctcacaggagcatcaacagcaagtg
gtccaagccgtggagcgagccaaacaggtgaccatggcagagctaaatgctgttattgga
gtacgtggactaccaggccttccgcccacacagcagcaccttagtggtgcccctgtgccc
ctcactcctcaccctgctggcctccatccctctcagctcggtggttcggctggtctcctg
gctctatcaggaggacttggtgctctccctccccacatgttgggaaaagatgtcggcgat
aaaaagccccacatgtccgggccagacgcacactcatcaggacccgagcacctgagagaa
cgagagcctggcacaagtcactcattgctgccagaaagtcttaggaattcagataagaga
cgcaacggaccagagttttcaaacgacaccaagaaacgcaaggttgacgacaaggactcg
agccactatgacagcgacggggagaagagtgatgataatttagtggtggatgtttcaaat
gaggatccagcctcaccccggggcacgcctctcccctcgcctcgagaaaatggcctggat
aaagcacgtcttctcaagaaagacccttgtagtccagcctctactgcatcatctgccagc
tcctcctccctgaagtccaaagagatgacgatgagagacaaggcaggaacacctgggctc
aagtcgagcacacccaccccgagaggtgactccacccctggtccaagctccactcctgga
atccgtcccagtctatcaaaacccccatccatggaaataccacatccacccactgcaggt
ttgcggacccccctggctgtacccggcccatacccgggtgcatttggtatgttgccccat
gcaccagggatgaatggggatctggccagtgcagccggagctgcggcctacgctgctgga
ttgcacaacatgtcaccccaaatgagtgttgctgctgcggctgctgtggctgcatacggc
cgctcacctatggttggttttgatcctcattctcacatgcgagttcctgggatgacggga
atccctggcggcaaacctgcttattcttttcacgtggcggccgacggacagatgcagcca
gtacctttccccccggatgctttggtgggcccagggattcctcgccacgcccgccagatc
aacacactgaaccatggggaggtggtgtgcgccgttaccatcagtaacccgacccgacac
gtctacacaggagggaagggttgcgtcaaggtctgggacatcagtcacccgggaaacaag
agccccgtgtcgcagctggactgtctgaaccgagacaactacatccgctcctgttgtcta
ctccccgatggccggacactgattgtgggaggtgaggcgagcacgttgtcaatctgggat
ttggccacgcccactcccaggattaaggcagagttaacatcatcagcaccggcgtgttac
gctctggccattagcccggactccaaggtctgcttctcttgctgcagcgatgggaacatc
gcggtctgggatcttcacaatcagacgctagttaggcagttccagggccacacagatgga
gccagctgtattgacatctccaacgatggcaccaagctgtggaccggaggcctcgataac
accgtgcgctcctgggatctgagagagggacgccagctgcagcagcatgacttcacatca
cagatcttctctctcggctattgtccgacaggagagtggctcgctgttggaatggagagc
agcaacgtcgaggtccttcacgtcaccaagccagacaagtaccagcttcacctacacgag
agctgtgtcctgtccctgcagtttgcctcctgtggtaaatggtttgtgagcacaggaaag
gataacttactgaatgcatggagaacaccctatggagccagtatattccagtctaaagaa
tcctcttcggtgttaagttgtgacatatcagtggacgacaaatacatcgtcactggttca
ggagacaagaaggccactgtttacgaggtcatctactaa
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