Pseudoliparis swirei (Mariana hadal snailfish): 130196482
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Entry
130196482 CDS
T09868
Symbol
xbp1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130196482 (xbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196482 (xbp1)
04131 Membrane trafficking [BR:
pswi04131
]
130196482 (xbp1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
130196482 (xbp1)
Membrane trafficking [BR:
pswi04131
]
Autophagy
ER-phagy
ER stress-related proteins
130196482 (xbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
130196482
NCBI-ProteinID:
XP_056274647
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All DBs
Position
7:17498328..17501065
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AA seq
403 aa
AA seq
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MVVVTAGSAGPQKVLLISGKQSGLSPVGYSRPISVLLPPASPASSDSDSNNSSAGPPVRK
RQRLTHLSTEEKALRRKLKNRVAAQTARDRKKAKMGELEQQVLELELENQKLHIENRLLR
EKSSGLLTENEELRQRLGLEPLDTKEEVQSLLSSGNDAGLGIGSSERSTQATCASAAGAG
PAAPKSEDFSMDSDDSDSSDNESDLLMGILDILDPELFLKSCEQECPEPPVLLVGGGDAV
PAAAPAPLGAPPVKLEALNELIHFDHIYTKPVEEVGAGGQCDGWESDTEDEDEEEDEKKS
DEAAYIVVVADDDVIVEEETVCVKDEPEEVVIPGNPLDDFFSGVSAAALGGGGLDKEACL
ADTYSDSGYEGSPSPFSDMSSSPLCSESTWDDMFANELFPQLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggtaacagccgggtccgcgggcccccaaaaagtgctcctgatatccgggaag
cagagcggcctctccccggtgggctacagccggcccatctccgtcctcctgccgccggcc
agccccgcgtcgtcggactcggactccaacaactcgtccgcggggccgccggtacggaag
cggcagaggctcacacacctgagcacggaggagaaagcgcttcgcaggaaactgaagaac
agagtcgctgctcagacagccagagacaggaaaaaggccaaaatgggcgagctggagcag
caagtcctggagttggaactggagaaccagaagcttcacattgagaaccggctccttcgg
gaaaaatccagtggcctcctgacagagaacgaggagctgagacagagacttgggctggag
cccctggacactaaagaggaggttcagagtttgttgtccagcgggaacgacgcaggtttg
gggatcgggtcttctgagcgcagcactcaggctacgtgtgcctccgcagcaggtgcaggc
ccagcagcccccaaatctgaagacttctcaatggattcagatgattctgactcttcagac
aatgagtctgatttgctcatgggcattctggacatccttgacccagagctgttcctcaag
tcctgcgaacaggagtgcccggagccgccggtgctgctggtcggagggggggacgcagta
cctgccgccgcacctgcgcctctgggggccccaccagttaagctggaggcccttaatgaa
ctgatccactttgaccacatctacacgaagcccgtggaggaggtgggcgcgggcggtcag
tgtgacggctgggagagcgacacggaggatgaggatgaagaagaagacgaaaagaaaagc
gacgaggccgcctacatcgtcgttgttgccgatgacgacgtgatcgtggaggaggagacg
gtctgcgtgaaggacgagccggaggaggtggtcatccccggcaacccgctggatgacttt
ttctccggcgtctcggcggcggccctcggcggcggcggcctggacaaggaggcgtgtctc
gccgacacttacagcgactctgggtacgaggggtccccgtccccattcagcgacatgtcc
tcctcgccgctgtgctccgagagcacctgggacgacatgttcgccaacgaactcttcccc
caacttatctga
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