Pseudoliparis swirei (Mariana hadal snailfish): 130196486
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Entry
130196486 CDS
T09868
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130196486 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130196486 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130196486 (spaw)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Transforming growth factors (RSTK binding)
130196486 (spaw)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
130196486
NCBI-ProteinID:
XP_056274651
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Position
7:18464288..18466726
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AA seq
418 aa
AA seq
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METRVLTVFCTFLVCSFGAVFSTQDHRYLKDLRSTLAFRSLSFNQRSRYPLYMMQLYHSF
RTADFSPSIAGNAATMQGHNSSAHSSDSVLSLMAKDCHQVGERWTVMFDMSSISTGELIQ
LAELRLRLPAFSASKRATVDLYHSRKRRCDPDSTSCPDEQLFLGSFPTSASSTKEGWKVF
NVTALLKYWLYQGGVSSQEASGEPEVDHGSGSGDGGEAADQSLFKSLGMRQIKTHHPTTN
RVMMVIFSKHNLPREGHMAYSLIHTVENSKYVTTDRASSDGQSRRHKRNRVERMRMAAGA
APTAAAVAAAEPSLGSRCQKVDMWVDFEHIGWDEWIVHPKRYNAFRCEGECPTPLDESFY
PTNHAYMQSLLQHHHPERASCPSCVPTRLSPLSMLYYENEDLALRHHEEMVVEECGCH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccagagtcctgaccgttttctgcacattcctcgtctgttctttcggagctgtt
ttctccacacaggaccacagatacctcaaagacctccggtccactttagcattcagaagt
ctctcattcaatcagcgcagcagatatcctctatacatgatgcagctgtaccattccttc
aggaccgccgatttctcaccatcaattgctggcaacgccgctacaatgcaaggccacaac
tcgtcagcgcacagttctgactccgtcctaagtctgatggccaaagattgccatcaggtg
ggtgaaagatggaccgtcatgtttgacatgtcatccatctccactggtgagcttatccag
ctggcagaacttcggctccgactacctgctttctcggcctctaagcgtgccactgtggat
ttatatcactccagaaagcggcggtgtgacccggacagcacatcgtgcccggatgagcaa
cttttcctggggagttttcccacatcagccagcagcacaaaggaaggttggaaggttttt
aatgtgaccgctctgttaaaatactggctgtaccagggaggagtgtctagccaagaggcc
tcaggagaacctgaggtggaccacgggagcggttctggggacggaggtgaggccgctgac
cagtctctcttcaagagtttgggaatgcggcaaataaaaacacaccatccgaccacaaac
agggtcatgatggtgatcttctccaaacacaacctgccccgggaaggccacatggcgtac
agcctcatccacactgtggagaactccaagtacgtgacgacggacagagccagcagtgac
ggtcaaagtcgtcgtcacaaaaggaaccgagtagagaggatgaggatggcggcgggagcg
gcgcccactgcggcggccgtggcagcagcggagccgtccctcgggtctcggtgtcagaag
gtggacatgtgggtggactttgaacacatcggctgggacgagtggattgtgcacccgaag
cgctacaatgcatttcgctgtgagggcgagtgtccgacacctctggatgagtccttctac
ccgaccaaccacgcatacatgcagagcctcttgcaacatcaccacccagagagagcctcc
tgcccgtcctgtgtgccgacgcgcctcagcccgctctcaatgctgtactacgagaacgag
gacctggccctgcggcatcacgaggagatggttgttgaagagtgcggatgtcactga
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