KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130196527
Entry
130196527         CDS       T09868                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130196527
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130196527
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    130196527
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130196527
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 130196527
NCBI-ProteinID: XP_056274736
LinkDB
Position
7:complement(18966990..18986104)
AA seq 1147 aa
MMTSVVSNQARGARDSTLSTTTQTTQPQATAEQLLLAQMFYDKNDAEFEDKVKQLIEVTG
KTQDECMVALHDCNEDVNRAINFLLESTPDTTSWETVGKKRSVVKEGGPSEIKESREKKG
EREASRGRGASNRRGRGISRGREGRLEENGFEVAPGERGGERGGRGRGRGTVVRGRGRAA
DGRFSSQGMGIFNPADYTANSRARQDTWAGNESAEGTGTWEGNLEDWAAEDWNEDLFETK
VFTASSPPANYIKHGPNSDQVSLLPKTGGGSMDSDLGAIVDGPSAVHLGQSLVFTNSHHN
GRTATHSYANATANSYAHAASASTTYAHAALSSVLGSGFGSLNAPKPTYASDIRTSEQLN
GPRLGQRASHILGNASSISVSKDAGPPPVQNPVPACSRSLEVKAQRVAYSPVTAQHMEMK
LQPEPSAVLSQMVQRQQASILPHAPQVPTPPGHESSVPHLRDGASPGGKLMCMEHSLSEP
PQRQLKTQRRRVPPSSKIPSSAVEMPGSADILGLNFQFGGLDFGSEAGSGTINMAQTEPV
RVQAKTQVPAPAASVPTQQPQSSLFSKPGSVSEHMSSLPTLPLAVSDPNFPSPSFGLPSA
TPSPSIGLPSAAAPPSSTAPATTSRVESSGPRSLPPHLGFSQTKDVSSASALTNGYSGMK
TQNTHDTTSTSRTVKTESPVMTSDVGHHIHSPAVTPSHSTSIPSLSSHVTSTPSTGSALA
TSASLTISNVEHNSIGNLHAYSSSASQAVDSCPSAPLAVSSSIANGLHPSGAPGLTANGT
NATLSAAGSRTAPLLTTSGKAPPNLSQGVPPLLANQYIMGPGGLLPAYPQIYGYEDLQML
QSRLPMDYYGIPFPGTTPTMPGRESLANNPYSGEATKFGRNDSSSPAPPTSMSTAGVQSQ
PQQAPQAGTQGQGQGQQTQNQAFINPPLPPGYGYTGLPYYAGVPGVPSAFQYGPTVFVPP
AAAKQPAMGLANPSNQYHQQHQPSYAQHAYGTAFDDLSQAHGGEYSKGGYGGSVQSQAKS
AGSGPGKAPGLSGSGTSGGVPDMGGSIYSKTQSFDKQGFHTGTPPPFSLPSALGGTGPLN
PGGAPGYAPAPFLHILPPHQQPHSQLMHHHLTQDGQGGPGQRNQSSNMQQKTQGSKSSYG
SSPYWAN
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatcaagcccggggggctcgggactcaacgctgtccacg
actacacaaacaacacagccacaggctacagcagaacagcttcttttagcccaaatgttc
tacgacaaaaatgatgctgaatttgaagacaaagtcaaacagctgattgaggtaactggg
aaaactcaagatgagtgcatggtagccctccatgactgcaacgaagatgtaaacagagcc
atcaattttctgctggagagcacccctgatacaacatcctgggaaactgtggggaagaag
cgtagcgttgtgaaagaaggaggaccctcagagataaaggagagcagggagaagaaagga
gagagggaggcaagtcgcggacgtggggcgtccaacagaaggggcagaggcatcagccga
gggcgcgaaggtcgcttagaggagaatgggtttgaggtggctcctggagagagaggggga
gaacgtggaggacgaggacgaggcagagggactgtggttcgcggtagaggaagggcagct
gatggcaggttctcttcccagggaatgggcatcttcaatccagctgactacacggctaac
tcccgagctcgccaggatacatgggcaggcaatgaaagtgctgagggaactggaacatgg
gaaggcaatctggaagactgggctgcagaggactggaatgaggacttgtttgagaccaaa
gtattcactgcctcctctcctccagcaaactacatcaaacatggacccaattcggaccag
gttagcctactgccgaagactggagggggttctatggactctgatttgggagcgatagtt
gatggcccctcagccgtgcatttgggccaaagcctggtttttaccaactctcatcacaat
ggacgcactgcaacacacagctacgcaaacgccacagccaacagctacgcccatgccgcc
tctgctagtacaacctatgcacatgctgcactgtcctcagtcctgggttctggttttggg
tccctgaatgcgccaaagccaacgtatgcctccgacatcaggacatcagagcagctcaat
ggtcctcgacttggtcagagggccagtcatattttgggcaacgccagcagcattagtgtt
tccaaagatgcagggccacctccagtacagaaccctgttccagcatgctctcgctcgcta
gaagtcaaggcccagagagtggcgtatagtcctgttactgcccaacacatggagatgaag
cttcaaccggagccatcagcggtgctcagtcagatggttcagagacaacaggcctccatc
cttccgcatgcaccacaggtccccacaccaccaggtcacgagtcatccgtgcctcatttg
agagatggagcttctccaggagggaagttgatgtgtatggagcattctctctcagaaccc
cctcagcggcagctaaagactcagagacgcagagtacctccttcctcaaagatcccgtcg
tcagcagttgagatgccgggctctgcagatatacttggcctgaattttcagtttgggggt
cttgactttgggtctgaggctggtagtggaacgataaacatggcacagacggagccggtc
agggtacaggccaagactcaggtcccagctccagcagcttctgttcctacacagcagcca
cagagcagcctgttctccaagccaggatctgtgagtgaacacatgagcagcttacccacc
ttaccactagctgtgtcagatcccaatttcccctcaccctccttcggcttacccagtgcc
acgccctctccctccatcggtctccccagtgcagctgcacccccctcttctacagcccca
gccacaaccagccgtgtggagagcagtggcccgaggtccctgccacctcatctgggcttc
tctcagaccaaagatgtctcctcagcttctgctctcacaaatggctacagtggcatgaag
acacagaacacacatgacactacgtcaacatctagaacagtcaaaactgagtctcctgtt
atgacgagtgacgttggccaccacatccactcccctgcagtcacaccgtcccactcaaca
tccatcccctcgctcagcagtcatgtgaccagtactccctcaacgggatctgctcttgcc
acaagcgcctccctcacgataagtaatgtggagcacaatagtattggcaacctccatgcc
tattcatcgtcggccagccaagctgtcgattcgtgtccttcagctcctctggccgttagc
agctcaatcgccaatggtctgcacccatctggagcacctggactaactgctaatggcaca
aatgccacactctcagctgcaggcagccgcacggcacccctgctcaccacttctggtaaa
gctcctcccaacttgtcccaaggagtgccacctctcctggcaaaccagtacatcatgggc
cctggtggcttgctccctgcttacccccagatctatggatacgaggacttgcaaatgctg
cagtctcgccttcctatggattattatggtataccattccctggtactacacctactatg
cctggaagagagagcctggctaataatccatattctggtgaagcgacaaagtttggcagg
aatgattcttcatctccagctcccccaaccagcatgtctacagccggggtgcagtcccag
ccccagcaggccccacaggcaggaacacaagggcagggccagggtcagcaaacacagaac
caggccttcatcaatccccctctgcccccaggctatggatacactggtctgccatactac
gccggtgtaccgggggttccctcggctttccagtacggccccacggtctttgtgcctcct
gctgcggctaaacagcctgcaatgggactggccaacccttccaatcagtatcaccaacag
catcagcccagttacgcacagcatgcatatggcacagcctttgatgacctgtctcaagcc
cacggtggggagtacagtaagggagggtacggaggctctgtccagtcacaggcaaagtca
gcgggcagcggcccagggaaagcaccaggactgtcggggtcaggtaccagtggaggagta
cctgacatgggaggctcaatctacagcaaaactcaatcatttgataagcagggcttccac
acagggacaccacctcccttcagcctgccttcagcactggggggaacggggcccttgaac
cctgggggtgctcctggctatgcccctgctcccttcctgcacatcctgccaccgcaccaa
cagccccactctcagctgatgcaccatcacctcacacaggacggacagggtggtcctggt
cagcgcaatcagtccagcaacatgcagcagaagacccaaggcagcaagtccagctatggc
agctccccctactgggccaactga

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