Pseudoliparis swirei (Mariana hadal snailfish): 130196541
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Entry
130196541 CDS
T09868
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130196541 (tfip11)
Spliceosome [BR:
pswi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130196541 (tfip11)
Other components
Complex C specific factors
130196541 (tfip11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130196541
NCBI-ProteinID:
XP_056274756
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Position
7:1067706..1073128
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AA seq
834 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEVESFEVTDWDLANEFNPERRRHRQTKDQATYGIWADKDSDED
ERPSFGGKKSKDYTAPVNFVSAGLRKAAAEEKRQQEKEEGGSDDSEDDGPSAPPPPRSTA
PQHLQMGTFRGSQSQRFAGGIQSGKGIGNWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
INPIEAKLRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGSVGK
KKPKYSYRTVDELKAKGKLAGRSTVASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
DEGPPSLSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSTRRLQHEKDVVVSLSHESRA
LQSRLELEKDAIQRIDAVLALVQRFPSGEMAPGEAPTLQECAQIFETLQTDYYEEYKMMG
LADLAVAVVQPLLKEKLRSWDPLKDSSYCLEDIGQWRAILESRDLHSSAPDSNMDPYHRL
LWEVWIPVMRPCMTGWQPRIVGPMVDCVEVWAPLLPLWILEYLMEQLILPRLQREVDNWN
PLTDTVPIHSWIHPWLPLLQARLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFNWVMDWEGMLSPSSLVSLLDKNFFT
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDSLLSQPLVKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGVSAGVPTNFKDLIQTKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccatctttatgggaggagagaggaggaagaggaaggtgttgaggtggag
agctttgaggtgacagactgggacctggccaacgagttcaatccagagcgtcgcagacac
aggcagaccaaggaccaggcaacctacggcatctgggctgacaaggactcagacgaggac
gagaggccgagcttcggaggcaagaaatctaaagattacactgctccagtaaactttgtg
agtgctggtctgcgtaaggctgcggctgaggagaaacggcaacaggaaaaagaagaagga
ggctctgatgactctgaggacgatggtccttcagcacctccccctcctcgcagcactgca
ccccaacatctccagatgggtactttccggggtagccagtcccagaggtttgcaggtggc
atccagtctggtaaaggcatcggtaactgggagaagcacacaaagggaattggacaaaaa
cttttgcagaaaatgggctaccaacccggcaaaggcctgggcaagaacgctcaaggtatt
ataaaccccattgaggcaaagcttcgtaaaggcaagggagcagtgggtgcttatggcaac
gagcgaacgcagcagagtcttcaggactttcctgtggttgattcagaggaagaggaggaa
aaggagtttcaaaaggagctaggccagtggcgaaaggatcctgcagggtctgtaggaaag
aagaaacccaagtactcctacagaactgtagatgagctgaaggctaaaggcaagctggcc
gggcgcagcacagtggcgtcagctggagagctggcacaggtcaaggtaatcgatatgaca
ggaagggaacaaaaggtttattacagttacagtcagatgtccaacaagcacagtgttcca
gacgaaggtccaccgagcttgtccactcaggatcagaagggatctggctttgctctccct
gaactggaacataacctgcagctcctgatcgacctcacagaacaggacatattacagtcc
accagacgtctgcagcatgaaaaggatgtcgttgtgtctctgagccacgagtcacgagcg
cttcagagcagactggagctagagaaagatgccattcagagaattgatgcggtcctggca
ttggtgcagcgttttccttctggggagatggcgcctggggaggctcccaccctgcaggag
tgcgcccagatctttgagactttacaaacagactattatgaagaatacaagatgatggga
ttggcagacttagctgtcgctgttgttcaaccattactcaaggagaaacttcgctcttgg
gacccgctgaaggacagctcttattgtctggaagacatcggtcagtggagagcaatcctc
gaatctagagacctccatagcagtgccccagattcaaacatggacccttaccacagactg
ttgtgggaagtgtggattccagtgatgcggccctgtatgaccggctggcagcctcgtatc
gtggggccaatggtggactgcgtggaagtgtgggcccctcttctccccctgtggatcctg
gaatacctgatggagcagttgatcttaccccggctacagcgagaggtggataactggaac
cctttaacggacacagtccccatccactcctggatccacccttggctgcctctgctccaa
gcacgtctcgagcctctttacccaccgatcaggagcaaactatccaatgccttgcagcga
tggcatcccagtgacacttcagcccgcctcatcctgcagccttggaaagatgtgttcaca
ccaggtgcatgggaggctttcatggtgaaaaatatcatccccaaactcgctctgtgtctg
gaggagctggttattaaccctcaccagcagcagatggagccatttaactgggtgatggac
tgggagggcatgctgtccccctccagcctcgtgtccctgctggacaagaacttctttaca
aagtggttgcaggtcctgtgttcatggttgagcaacagtcctaactatgaggaaatcact
aaatggtacctgggctggaaaagtatgtttagtgacagcttgttgtcgcagccgctcgtc
aaagagaaattcaacgaagctctggacataatgaaccgcgcagtgtcttcgggcatgggt
ggatacatgcaacctggtgcacgggagaatattgcctatctaacacaaaccgagagacgg
aaggacttccagtacgaagcgatgcaggagcgcagagatgccgagagcgtggctcacaga
ggagtcagtgctggtgtgccgactaactttaaagatcttatccagaccaaggcagaggag
aacaacattgtcttcatgcccttggtagccaaacggcacgagggaaaacaactgtacacg
tttgggcgtatcgtcatctacatagacagaggggttgtgtttgtgcaaggagagaagact
tgggtgcccacgtctttgcagagtctgatcgatatggccaagtga
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