Pseudoliparis swirei (Mariana hadal snailfish): 130196627
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Entry
130196627 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: steroidogenic factor 1-like
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196627
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130196627
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
130196627
Nuclear receptors [BR:
pswi03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
130196627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130196627
NCBI-ProteinID:
XP_056274882
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Position
7:30669221..30691830
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AA seq
496 aa
AA seq
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MLGDKAHGVTLKVMEYTYDDDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRY
TCAENQECKIDKTQRKRCPFCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQ
QKKALIRSSGFKLEGAAPPPASPSLQTDYGFTGMPPAIASKSLLPSSTPSSIPSTEYEAN
LYGPPSLGGMAMQAHAPLAQYQYSAFPGRPIKAECPDYTSSPESLSGYPYPDMYPSASSP
PPPPPLGLPPLVLELLRCDPDELAVQSKIVAHLQQEQSGRRRRRRRGGGGGGGTFGLMCR
MADQTLFSIVEWARSCIFFKELRVGDQMKLLHNCWSELLVLDHIFRQVQHGQEDSILLVT
GQEVELSFVLSQAEATLSALVQRGQELAARLRALQLDRREIACLKFLLLFNPNVKLLEDQ
AFVEGVQEQVNGALLEYTLSTSPQFQDKFSHLVVRLPELRSLSTQAEDYLCYVHLSGEVP
CNNLLIEMLHAKRACV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagacaaggctcacggtgtcacgttgaaggttatggagtacacgtatgacgac
gacctggaggagctgtgtcccgtgtgcggggacaaggtgtccgggtaccactacgggctg
ctcacctgcgagagctgtaaggggttcttcaagagaaccgtgcagaacaacaagcggtac
acgtgcgcggagaaccaggagtgcaagatcgacaagacgcagcgcaagaggtgtccgttc
tgccgcttccagaagtgcctgaacgtgggcatgcggctggaagcggtgcgcgcggaccgc
atgcgcgggggcaggaacaagttcggcccgatgtacaagagggaccgggccctgaagcag
cagaagaaggctctgatccgctccagcgggttcaagctggagggcgcggcccccccgccg
gcctccccctccctgcagacggactacgggttcaccggcatgccgcccgccatcgcctcc
aagagcctgctgccctcctccaccccgagctccatcccctcgacggagtacgaggccaac
ctgtacggacccccatccctcgggggcatggccatgcaggcgcatgcgcccctcgcccag
taccagtactcggccttccccggccggccgatcaaagccgagtgccccgactacaccagc
tccccggagtccctgagcggatacccgtaccccgacatgtacccgtcggcctcctcgccg
ccgccgccgccgccgctcggcctgccgccgctggtgctggagctgctgcgctgtgacccg
gatgagctggcggtgcagagcaagatcgtggctcacctgcagcaggagcagagcggccgg
cggcggcggcggcggcggggcggcggcggcggcggcggcaccttcggcctcatgtgccgc
atggcggaccagactctgttctccatcgtggagtgggcgcgcagctgcatcttcttcaag
gagctcagggtgggagatcaaatgaagctgctccataactgctggtctgaacttctggtc
ctggatcacatcttcagacaagtgcagcacggacaggaagacagcatcctgctggtgacc
ggccaggaggtggagctgtccttcgtcctgtcccaggcggaggccacgctgtccgctctg
gtccagaggggtcaggagctggcggcccggctgcgggcgctgcagctggaccgccgagag
atcgcctgcctcaagttcctcctgctgttcaaccccaacgtgaagctgctggaggaccag
gccttcgtggagggcgtccaggagcaggtgaacggcgccctgctggagtacacgctgtcc
acctccccgcagttccaggacaagttcagccacctggtggtgcggctgccggagctgcgc
tcgctcagcacgcaggccgaggactacctgtgctacgtgcacctgagcggggaggtgccc
tgcaacaacctgctcatcgagatgctgcacgccaagcgggcgtgcgtgtga
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