Pseudoliparis swirei (Mariana hadal snailfish): 130196629
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Entry
130196629 CDS
T09868
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130196629 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130196629 (loxhd1b)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130196629 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
Others
130196629 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
130196629
NCBI-ProteinID:
XP_056274884
LinkDB
All DBs
Position
7:complement(25812793..25838825)
Genome browser
AA seq
2262 aa
AA seq
DB search
MGAKDKKKKKGSKKEEEHASGEEEEGKKKKKEKKKKGSVRGDSDDDTKKTKGKKKKVENY
VEIYENELRNYEPDQVEDYEDEYHKKKVYEVVTITGDERGAGTDANVFVTLFGDGGITPK
VHLASNTEKRSRTAFERNKTDVFRIRTHNIGPLKKIRIEHDNTGLSANWFLDRVVVTDVI
RPHLRFYFACNNWFTKEEGDCLYIRDLLGSLDPMDIPKYNKYIVSVFTADVKGSGTDADV
FINIFGEFGNTGERRLNNDKNNFEKGTEDKFTIEAPNLGKVRKITIGHNNKGSSAGWFVD
KVVVDDMGNKMVYEIPISRWFAMDEDDGKIQRDMLVGGNQPIGIVYSVQIVTGNIRGAGT
NSKIHVVMHGSKGMKNSGKVFLEGGKFERGLTDIFNVEIAALISPLSRVTVGHDNDGVSA
GWYCEKVVVYCSFTGLEQTFPCSKWLDEGEGDGLIERELYEMVSLRQRRQKKYPWSLWIW
TSDIPGAGTNADICFQVYGEKGKSDEMGLNNKTDNFEQGQVDRFMVELPDLGRFTKLRIW
HEKRNPFAGWHLSKATLMKTLTKEKYKFPCERWLDTNEDDNEVVRELSATGDSVAEPLPG
IKYRVTVCTGTVGGSGTDASVYLSLIGDLGDTGRRELVVCKNNVNKFEKGNMDEFIVEAV
ALGKIRRVRIGHDGKGGGCGWFLDKVIVREEGQAGADAEEFPCNRWLDRNEDDGQIVREL
VPFSDGQRLYNVDYHIAVKTGSIPGSSSDSNVFVKLYGEKCDTSTMMLLVSANNLGNYFE
TARVDIFIVETVDIGQINRLMIGHTNEGMRAGWFLDSVQLMVPVHGKQYMFPSHRWLSRG
DADGKTEVEIYPSEILDIEQLINYEVTVVTGDVTFAGTNAGVFIQIYGDKGKTEVITLES
RSNNYERNATEIFKIEGKDVGKVFKVRIGHDDLGVGSGWFLETVDVKHLIMALVPKEKKK
EDKKKKKKKKKDEEEAEEEGGEEMQEVVLTYHFPCSRWLAGGEEDGELVVELLPEDAEEL
EVNTYEVCVFTGDLLGAGTDANVFINIYGENGDTGERCLKKSDNLNKFERQQEDVFIVTA
VDLGVLKKLRIRHDDTRSYSSWYLDRVEIVDTKEDTTYYFPCTRWLAVDEDDGQIARELV
PVDEAFMRKDEDEEGTGATLGLEQKSMSTTYTLKIKTGEKKYAGTDANVFAILFGEKDNT
GVINLKACKHYKNKFEQGMVNEFTVEAVDLGDLEKLRIGHDNSGGSSGWFLNFVEIDAVS
QGQRLHFPCGHWLDKEEDDGAIVRDLYPAELQTELYMPFVPYEIKIYTSDVFGAGTDADV
FIVLYGREGVCTQQKHLCVNKRERRLHFERGAEDMFIVELEDVGEDIEKIRIGHDNKGSN
PGWHLDRVEIRRQLRKGKGSETTIFPCECWLAKSEDDGETVRELVPSDIITEKLLRDGKL
KTTEIEVEDALEIHMYSVSVRTGDMYGAGTDANVFLTIYGDLGDTGERKLAKSENNKNKF
ERGEVDKFSIEAVDLGQVFKIRIRHDNSMVGADWYLDQAEVLDFETEEVYMFLCERWLSK
KKEDKRIERTFFVKGYEGERNIDPNSKKMLQAKLGLDRNANKKKKKKKVAEEGPIIPYHF
TLSTGMERDASSTARVYVIITGPNDVETDRLWLDLPEGKKSFTAGTMEHFVCSGTDVGEI
KRVELGHNGVTPESCWLVDELSVAVPTKGIKYSFPCNCWLAKDRGDGLTARLFNVLDATT
ININRKVIYSVTVVTGDTQFAGTDTNIFLTVFGANGSTEEMLLVKNEDRFERDQQDTFSL
EIDDIAPLKKIRVQIDGSGSRPDWFLDRIMMRSLNTEETYVFTYEDWLSKTKGPKRIKVC
ELAAVVEEEEMVERTTYIINVQTTDAGGAGTDANVCVVVFGEYGDTGTLPLKESTNRNKF
ERKTKDVFRFPEMLSLGELSKVRVWHDNKGPAPGWHLEYIDVKDEAMDQTFRFPCDRWLA
KNEDDTQIMRELACANNTAIDLSDKTKYEIATTTASTDGASTTENAWIVLEGRKARSKEF
VLENKKKKFLGGATDTFEFSSKNVGDIAGICIGHITKDGKKARKVAFWHVLDVVVTEREL
GNKYFFHCDAQIPLAAKKDKFQTFECFKTIESFASKVRGLVPVKYEIIVITGDVKGAGTD
ANVSISIFGANGDSGKRHLRQKFRNLFERGRTDRFVLEMLDLGELLRVKVEHDGSGSNCG
WYLACVEVTNTANSVTTIFQCGKWLDNRKADGQSQRVLYPKY
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgaaggataaaaagaagaagaagggctcaaagaaagaggaagaacatgcatct
ggggaggaggaggaagggaaaaagaaaaagaaagaaaagaagaagaaaggatcagttcgg
ggagatagtgatgacgataccaagaagacaaaaggaaagaagaagaaagttgaaaattat
gttgagatctatgagaatgagcttcgcaattatgagccggaccaagtagaagattacgag
gacgagtatcacaagaagaaagtgtacgaggtggtgaccatcaccggcgacgagcgagga
gccggcaccgacgccaacgtgtttgtcactctgtttggagacggtggcatcactcccaaa
gtccacctggcgagcaacacagaaaagaggagtcgcaccgctttcgaacgaaacaagacg
gatgttttcagaattagaactcacaatattggacctttgaaaaagataaggatcgagcat
gacaacacgggcctgagcgccaactggttcctggaccgggtggtggtgacggatgtgatc
cggcctcacctgaggttctacttcgcttgtaacaactggttcactaaggaggagggagac
tgcctttatatcagagacctgctgggcagcctggaccccatggacatacccaaatataat
aagtatatagtgagtgttttcactgctgatgtcaaaggcagtggcacggatgcggatgtc
ttcatcaatatcttcggggagtttggaaacacaggtgaaaggcgacttaacaatgacaaa
aacaactttgaaaagggcacagaggacaagttcaccatcgaggcaccaaacctgggcaaa
gtgagaaagatcaccatcggccataataacaaaggctcctctgcaggatggtttgtggac
aaggtagttgtggatgacatgggaaacaaaatggtttatgaaattccaatcagtcgatgg
tttgccatggatgaggatgatgggaagatccagagagacatgttggtgggggggaaccag
cccataggtattgtgtacagcgtccagattgtgacaggaaacatccgaggtgctggcacc
aactccaaaatccacgtcgtgatgcacggctcgaaaggcatgaagaacagtggcaaggtg
tttttggagggaggaaagtttgagcgtggcctgacggacatcttcaatgtggagattgct
gcgctcatcagtcccctcagcagagtcaccgttggacacgacaatgacggagtcagtgct
gggtggtactgcgagaaggtggtggtgtactgttcgttcacagggttagagcagaccttc
ccatgcagcaaatggctggatgagggggaaggagacgggctgatagagagagagctctat
gagatggtctcgctcaggcagaggagacaaaagaagtacccctggtccttgtggatctgg
acttcagacatccccggtgcaggaaccaatgccgatatctgtttccaggtatacggagaa
aagggcaagagcgatgagatgggactgaacaacaaaacagacaactttgaacagggacaa
gtggaccggtttatggttgagctgcctgatttaggaagatttaccaaactccgcatctgg
cacgagaaaagaaatccttttgcaggatggcatctcagtaaggcaactttgatgaagacg
ttaacgaaggagaagtacaagtttccttgcgagcgctggctggatacaaacgaagacgat
aacgaggtcgtgagggagctaagtgccacgggagactccgtcgctgagccgctgcccggg
atcaaatacagagtgacggtgtgcacgggcactgtcggcggcagcggcacagatgcatct
gtttatctgagtctgattggagacctcggggacaccggaagacgagagctggtcgtctgc
aaaaacaacgtcaacaagtttgagaaaggaaatatggatgagttcatagtggaggcggta
gctcttgggaagattcgcagggtgaggattggacacgatggcaaaggtggaggctgcggc
tggttcctggataaagtgatcgtgagagaggagggacaggcgggcgccgacgctgaggag
ttcccttgcaacaggtggctggaccgcaacgaggacgatggacagatcgtcagagagtta
gtgccgttctcagatggacagcgtctttacaacgtggactaccacatcgccgtgaagacg
ggcagcatccccgggagcagctcggactccaacgtgttcgtcaagctctacggagaaaaa
tgcgacaccagtacgatgatgctgttggtctctgccaacaacctggggaactacttcgag
acggctcgcgtggacatcttcatcgtggagaccgttgacatcggacagatcaaccgtctg
atgattggccacaccaatgaaggcatgcgtgccggctggttcttggacagcgttcagctg
atggttccggtccatggaaagcaatacatgttccccagccaccgctggctgtccaggggt
gatgctgatggcaagaccgaggtggagatctatccgagcgagatcctggacatagaacaa
ctgattaattatgaggtaacagtcgtgactggagatgtgacttttgctggcaccaacgcc
ggcgtgttcatccagatctatggggacaaggggaagaccgaggttatcacgctcgagagc
agatccaacaactacgaacggaacgccacagagatattcaagatagagggcaaagacgtg
gggaaggtcttcaaggtccgcatcggccacgatgacttgggggtcggatccggctggttc
ctggagacggtggacgtcaaacatctaatcatggccttggtgcccaaggaaaagaaaaaa
gaggacaagaaaaagaagaagaaaaagaaaaaagatgaggaagaagcggaagaggaggga
ggagaggagatgcaggaagtggtgctgacttatcatttcccctgttcgcgctggctggca
gggggagaggaggacggcgagctggtggtggagctgctgcctgaggacgcagaggagctg
gaagtcaacacctatgaagtgtgcgtcttcaccggcgacttgctcggcgccgggaccgac
gccaatgtcttcatcaacatttatggtgaaaacggagacaccggagagcgctgtctgaag
aagtctgacaacctcaacaaatttgagcggcagcaggaggatgttttcatcgtgacggct
gtggatctgggtgtactgaagaagctacgaatccgtcacgacgacacccgttcgtattcg
tcttggtacctggatcgcgtggagatcgtggacacaaaggaggatacgacgtactatttc
ccttgtacccgctggctggcagtggatgaggacgatgggcagatagcaagagagctagtt
cctgtggacgaggccttcatgaggaaggatgaagatgaggagggaacaggcgcaactctg
gggctcgagcagaaatccatgtccacaacatatactctcaaaataaaaaccggagagaag
aagtatgctggaacggatgccaacgtctttgccatcctatttggtgaaaaagacaacaca
ggggtcataaacctaaaggcttgtaagcactataagaataagtttgaacaggggatggtc
aatgagttcacggtggaggcggtggatttgggagacctggagaagcttcgaattggccac
gacaactcaggtggttcatctggttggttcttgaactttgtcgagatcgacgccgtctct
cagggtcagagactacacttcccgtgtggccactggttggataaagaagaggatgacggg
gcgatcgtgagggatctttaccccgctgagctacagacggagctctacatgccatttgtg
ccttacgagataaagatttacaccagcgatgtgtttggtgcgggaacagacgcggacgtg
ttcatcgtcttgtacggacgcgagggcgtgtgcacgcagcagaaacacctgtgtgtcaac
aagagagagagacgtcttcactttgagaggggagccgaggacatgttcattgtggagctg
gaagatgtcggtgaggacatcgagaaaatcaggataggacacgacaacaagggctccaac
ccaggatggcacctcgacagagtggagatcagacgacagctcaggaaaggaaagggttca
gagacgaccatattcccatgtgagtgctggctggccaagtcggaagacgatggggagacg
gtgagggagctggtcccctcggacatcatcacagagaaactcctcagggatgggaagctg
aaaacgactgaaatagaggtggaggacgctttggagattcacatgtacagcgtgtctgtg
cggacaggtgatatgtatggagcgggaaccgacgccaacgtttttctcaccatctacgga
gacctgggggacacgggagagcgtaaactcgccaaatccgagaacaacaagaacaagttt
gagagaggagaggtggacaagttctctattgaggctgtggacttgggccaggtgtttaag
atacgtattcgtcatgacaactccatggtcggggccgactggtacctcgaccaggccgag
gtgctggattttgaaacggaggaggtgtacatgttcctgtgtgagcgctggctgtccaag
aagaaagaggacaaacgcattgagaggacgttcttcgtcaagggatatgaaggggaaaga
aacatcgatccaaattccaagaagatgcttcaagccaaactgggactggacagaaatgcc
aacaagaagaaaaagaagaaaaaggtggcggaggagggtccaatcatcccctatcatttc
accttgtccactgggatggagcgggatgccagcagcacagccagggtctatgtcatcatc
accggacccaacgacgtggagacagaccgactgtggctcgacctcccagagggaaagaaa
tccttcaccgcgggcaccatggagcactttgtgtgttctgggacggacgtaggagagatc
aagagggtggagctcggccataacggtgtcacaccagagagctgctggctggtggatgag
ctgtcggttgccgtgccaaccaaaggtatcaagtacagctttccatgtaactgctggctg
gctaaagaccggggcgatggtctgaccgcccgactgttcaatgtgctggacgccaccacc
atcaacatcaaccgcaaagtcatttattcggtaacggttgtcacaggggacactcagttt
gcagggacggataccaacattttcctgacagtgttcggagccaatgggagcacagaggaa
atgctgctggttaaaaatgaggacaggtttgaaagggaccaacaagacacgttcagtttg
gagatcgacgacatcgctcctctgaagaagatcagagttcagatcgatggctctggaagt
cggcctgactggtttctcgacaggatcatgatgcggagcctgaacacggaggagacgtat
gtgttcacttacgaggactggctgtcgaagacgaaagggccaaagaggataaaggtgtgt
gagctggcggctgtggtggaggaggaggagatggtggagaggactacctacatcatcaat
gtccagactactgatgccggaggtgctggcactgacgccaacgtgtgtgtggttgtgttc
ggggagtacggagacactgggacgctgcctctgaaggaaagcaccaacaggaacaagttt
gagcggaaaacaaaagatgtgttcaggttcccggaaatgctgagtctgggcgaactgtca
aaggtgcgagtgtggcacgataacaaaggccctgctcctggttggcacctggagtacatc
gacgtgaaagacgaggccatggaccagaccttcaggttcccctgcgaccgctggttggct
aaaaatgaagacgacactcagataatgagggagctggcctgtgccaacaacaccgctata
gacctcagtgacaaaaccaaatatgaaattgccacaacaactgcgagcacagacggcgcc
tccaccacggaaaacgcctggattgtgttggaaggcaggaaagctcgttccaaggaattt
gttttggagaataagaaaaagaagttcttaggcggtgccaccgacacgtttgagttttcg
tcaaagaacgtgggagacatcgccgggatctgcatcggccacatcacgaaagatggaaag
aaggcgaggaaagtggccttctggcacgtcttggacgtggtggtgacagaacgggagctg
gggaacaagtatttcttccactgtgatgctcaaatccctctggcggccaaaaaggacaaa
ttccagacattcgagtgcttcaagaccatcgagagcttcgcgagcaaagtccgcggcctg
gtccccgtcaagtacgaaatcatcgtcatcacgggggacgtgaaaggagccggcacggac
gccaacgtttccatcagcatcttcggcgccaacggcgactcgggcaagcgccacctgcgg
cagaagttccgcaacctttttgagcgagggcgaacggatcgcttcgttctggagatgctg
gacctcggggagctgctgagggtcaaggtggagcacgacggcagcggctccaactgcggg
tggtacctggcgtgtgtggaggtgaccaacacagccaactcggtgacgaccatcttccag
tgcgggaagtggttggacaatcggaaggccgacgggcagagtcaacgagttctctacccc
aaatattag
DBGET
integrated database retrieval system
