Pseudoliparis swirei (Mariana hadal snailfish): 130196633
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Entry
130196633 CDS
T09868
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130196633 (lgi3)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
130196633 (lgi3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRRCT
LRR_1
LRR_14
Motif
Other DBs
NCBI-GeneID:
130196633
NCBI-ProteinID:
XP_056274891
LinkDB
All DBs
Position
7:complement(7969022..7975456)
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AA seq
548 aa
AA seq
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MPELGQRWTRLIGLSLLCLCLCLPSESNARRPPKSPRCPATCSCTKDSAFCVDTRAIPKS
FPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTLVADDAFAGLSHLQYLFIEN
NDIQALSKYTLRGLKSLTYLSLSNNNLQQLPRHLFKHQDILTDLDLRGNSFRCDCKIKWL
VDWLEKSNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFHSVSVESYQF
NEDQYVVFAQPDSGFCTLFVWDHVEMVFRKFHNITSRSAVYCKPVVINNSLYMVVAQLFG
GSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFVVADSSKAGSTSIYRWNS
NGFYTHQSLHPWHRDTHVEFLVVGGKPHLILSSASQTPVVYQWNRSQKQFIFFSQITELA
DVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRFIEIQTLPSRGSMAVYPFTVGLRQYL
ILGSDFSFSIVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDNKDIMLAASFKGNTLAYQH
LLLDLSAM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctcggacagagatggacgaggctgatcggcttgtcgcttctgtgtctgtgt
ctctgcctgccgagcgaatcaaacgccaggagacccccaaagagccccagatgtcctgcg
acctgctcctgcaccaaagacagtgccttctgtgtggataccagggccattcccaagagc
ttcccacctggaatcatctctttgacgatggtgaacgcagcctttactacaatcccagag
ggagctttctcgcaccttcatcttctgcagttcctgctcctgaactccaacacattcacc
ctggttgctgatgatgccttcgctggcctgtctcacctgcagtacctcttcattgagaac
aacgacatccaggctctctcaaagtacaccctcagaggactcaagtccctgacttatcta
tctctctcaaacaacaacctgcagcagctgccaagacatctcttcaaacatcaagacatc
ctcactgatttagacctgcgagggaactctttccgctgcgactgtaagatcaaatggctg
gtcgactggctggagaaatccaacacttctgttcctgccatctactgtgccagccctttt
gaattccagggacggcgaattcacgacctcacaccacgagacttcaactgcatcagcgca
gattttgctgtttacgaaaccttccctttccactcggtgtcagtggagtcctatcagttc
aatgaggatcagtatgtggtctttgctcagccggattcagggttctgcaccttgtttgta
tgggatcacgtggagatggtcttcaggaagtttcataacattacctctcgctctgctgtg
tactgcaaaccagtggtgataaacaacagtctctacatggttgtcgctcaactctttggt
ggatctcatatctacaagtgggaggaggacccgcagcgctttgtcaagatccaagacatt
gacacaactcgcgtgaggaagcccaactttgtggagaccttccagctggatgatgagtgg
tactttgtagtggcagacagctccaaggcaggctccaccagcatttaccgctggaacagc
aatggcttctatacccaccagtcccttcacccctggcatcgggacacacatgtggagttc
cttgttgttggagggaagcctcacctcatcctctccagcgcctctcagacgccggtggtt
taccagtggaaccgaagccagaagcagtttattttcttctcccaaatcacagagctagca
gatgtacagatggtgaagcacttttgggtgaggaaagttctttacctttgcctcacacgc
ttcatcggtgactccaagatcctccgctgggaagggcagcgtttcatagagatccagact
cttccctctcgaggctcgatggcagtgtatcctttcacagtgggcctccgccagtacctc
attcttggaagtgatttctccttctccatcgtatatctgtgggatgacctcactcaacgc
tttcagcccttccaggagctcaacatgagagcgccgcgagcgttcagcttagtatctgtc
gacaacaaggacataatgctggccgctagctttaaaggcaacaccctggcctatcagcac
ctgttgctggacctcagtgccatgtag
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