Pseudoliparis swirei (Mariana hadal snailfish): 130196668
Help
Entry
130196668 CDS
T09868
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130196668 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130196668 (rorb)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130196668 (rorb)
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130196668 (rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CEP131_C
LMNTD2_N
Motif
Other DBs
NCBI-GeneID:
130196668
NCBI-ProteinID:
XP_056274959
LinkDB
All DBs
Position
7:6318631..6344354
Genome browser
AA seq
476 aa
AA seq
DB search
MELPIHTQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDILYEEVQKHQARLLEQKQQQTGEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKASHGHGGGVQGGYYGMDSTQPSPDQ
SGLDMSGIKHIKQEPVYDLTPVPNLFSYGGYQDNQLGPNNVSMGELDRIAQNIIKSHLET
CQYTTEELQHLAWQTHTYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMEL
CQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFA
KSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDAL
AKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMATPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagctgccaatacacacccaaatcgaaatcataccttgcaaaatctgcggggacaaa
tcttcagggatccactatggagtcattacgtgtgagggatgcaagggtttcttcagacgc
agtcagcaaaacaatgcatcgtactcctgcccgcgccagaggaactgcctcatcgacaga
acaaaccgcaaccgctgccaacactgccgcctgcagaaatgtctcgccctcggaatgtcc
agagacgctgtaaagtttggccgcatgtccaagaagcaacgtgacatcctatacgaggag
gtccagaagcaccaagctcgactgctggagcagaagcagcagcagacgggcgaagcggaa
gctctagcgcgcgtttactcgtccagcctaaccaacggactgtccacccttaatcatgag
atcgggggcacctatgccaatggtcacgtcattgagctgcccaaggctagccatggtcat
ggaggcggagtccaagggggatactatgggatggattccacccagccatctccagaccag
tcaggtttggacatgtcgggcattaagcacattaaacaggagccggtgtacgacctgacg
ccagtgcccaacctgttcagctacggaggctaccaggacaatcagctgggacccaataac
gtcagcatgggagagctggaccgtattgcccagaatatcatcaagtcccacttggaaaca
tgtcagtacacgacagaggagctgcagcatttagcctggcagacacacacctatgaagag
gtcaagatgtaccagagcaagcctcgggacgtgttgtggcagcagtgtgccatccagatc
acccatgcaatccagtacgtggtggagtttgccaagcgcatctcaggcttcatggaactg
tgtcagaacgaccagatcctcctgctcaaatcaggttgtttggaggtcgtcttggtgcgg
atgtgcagggccttcaaccctctcaacaacactgtgctctttgaagggaagtacggaggc
atgcagatgttcaaagctctaggttgtgacgacttagtgagtgcagtgtttgactttgcc
aagagtttgtgttcactgcagctgacagaggaggagatcgctctgttctcagcagctgta
ctaatttccacagatcgaccgtggctgatggagcctcggaaagtgcagaagctgcaggag
aagatctactttgctctgcagcacattatgcagaagaaccacatggacgaagacgcactg
gcgaagctgatcagccgaatcccaacgctgtccgccctgtgcaccctccacaccgaggaa
ctccaggctttccagcagctacacccagaaacagtcaacgtcctcttccctccgctctac
aaagaactcttcaaccccgaccccaactctgccatggccacgcccaagtga
DBGET
integrated database retrieval system
