Pseudoliparis swirei (Mariana hadal snailfish): 130196757
Help
Entry
130196757 CDS
T09868
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
pswi04150
mTOR signaling pathway
pswi04218
Cellular senescence
pswi04910
Insulin signaling pathway
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130196757 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130196757 (tsc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
MICSWaP
Motif
Other DBs
NCBI-GeneID:
130196757
NCBI-ProteinID:
XP_056275053
LinkDB
All DBs
Position
7:complement(13662119..13671724)
Genome browser
AA seq
1070 aa
AA seq
DB search
MWAGLRVAQHGCALLGSTGLKVSNMSSLQSISELLLSLDSPELQEAEQVRAAINQQLSTD
RGGAVLSSLVDYYLDSSSPQVVLLLSSIREPHHKPLLEKLNEALNRPGSRLTGLTLLGHL
VRNQPPWVHHISRSALLPSLLRCLKTDSDVVVLVSGVLVLITLLPMIPQAGKQHIYDFFD
VFGRLVSWSYKNPGHVLAVHMLHLHAAAYSLFHRLYGMFPCSFISYLRLHYSMKENLDAF
QEVVKPMLEHVRVHPELVTGTQDYELDPSRWRCHEVHDIVIECSRVSLDPLESSCEEDMY
SSIRDPPPSPLPHLNLTCSPINTESVSSSGWSVCSQLLSEGLNSSYIQADVTWSPSSQCG
LSTPPPEPAATGSAPPTSRTASISGVTCPSSASFPATPLTKENQDGGHNKEQVKLVTQLE
SSIQPITELEGSGDVINNITENVQSSSSQPALLTSTPRREEPSPPDSLCFTPSRPSSTTQ
TPEGGSALSAQSSASPYELLFELALPRAAALFIGRMTQEVLQKAEKGGGVVGGGGGGGGE
EEQTSISPLEVLDQLIVHGHDAHQHLGRRLSAVNKSVDRSNFGGKQQSMKTKGPAQGEEL
QSLRSQLLLVHSQLQYERFKRQQHAVRNRRLLRRVINGTALEEHAVAMKGQLSVQDEEIR
SLKSSLQDEHRRHTHLQHDAHTHTTQLHTHNQLLLLQQQDEQRDKLRLKSELQECQNRLR
DLEAELQKANNKSYNAEHQLTQLSLKLCSSEQLQQQIFLLNQQLVLLRETNKALSEHLEG
GHTHQDTEEAMLQCSLGHEFQRLKDSDVQQRQKLEAANHRTAELEDQLAKKDQLVLDQKK
LLEDTKTQSRGELAACESRCEALRRVTQTLQTETLHLYSQIHLEAHSRPQDFRPNNASVA
VPAPQGHKPRPFSSSAGIVNGAAATFSTSPLHLLCCSSSPMNLFSCSSSPLAVGSFLEQR
ARQLFRPTNHSQEEGDEEGEEEDGDEENEEQEEEEEEQKAQPGSPPLCQEAEILLAGSPQ
PEPSSRTRVHSQTSSRTSSGPPAPPADLTLAVRQRRHELSIMDYDETLHE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggggcttcgtgttgctcaacatggctgcgccctgctcggatcaacaggtctg
aaggtgtccaatatgtccagcctgcagagtatcagtgagctcctgctctcattggacagt
ccagagctgcaggaggcggagcaagtcagagcagccatcaatcagcagctaagcacagac
cgaggaggtgcggtcctgtcctctctggtggactactacctggactcgtcctcccctcag
gtggtgctcctcctctcctccatcagagagcctcatcacaagccgctgctggagaagctg
aacgaagctctgaacagacctggatccagactgactggtctgaccctgctgggtcacctg
gtccggaaccagcccccctgggtccatcacatcagccgctcggctctgctgccgtcgctg
ctgcgctgcctcaagacggactccgacgtggtggtcctggtctccggggtcctggtcctc
atcaccctgctgcccatgatccctcaggccgggaagcagcacatctacgacttctttgac
gtgttcggacgcctcgtttcctggagctacaagaaccctggtcatgtgctcgcggtccac
atgctccacctccatgcggccgcgtattctctgttccaccggctctacgggatgttcccc
tgcagcttcatctcctacctgaggctccactacagcatgaaggagaacctggacgccttc
caggaggtcgtcaagccaatgttggaacatgttagggttcacccagagttggtcacaggg
actcaggactatgaactggacccatccaggtggaggtgtcatgaggtccatgacatcgtg
atcgagtgctccagagtgtctctggaccctctggagtcgtcctgtgaggaggacatgtac
tcctccatcagagacccgcccccctcccccctcccccacctcaacctcacctgcagtcct
ataaacacagagagtgttagcagctcaggttggtcagtttgctctcagctactctctgaa
ggtctgaacagctcctacatccaggctgatgtcacatggagtccctcatcacaatgtggt
ttatcgacgccccctcctgaacctgctgctacaggctccgcccccccaaccagcaggacc
gcctccatctcaggtgtgacatgtccctcgtcagcctccttcccagcgacaccactgact
aaagaaaaccaagatggcggccacaacaaggagcaggtgaagctggtcacgcagcttgag
tcgtccatccagccaatcacagagttggagggaagtggtgatgtcatcaataacatcaca
gaaaatgtgcagtcctcctcctcccagccggccctcctcacctccaccccccgtcgggag
gagccctctcctcctgactccctctgcttcaccccctctcgcccctcctccaccacccag
acgccagagggaggctccgccctctccgctcagagctctgcctctccgtacgagctcctg
tttgaactcgctctgccgcgagccgccgcgctcttcatcgggaggatgactcaggaagtg
ctgcagaaagctgagaagggaggaggagtagtaggaggaggaggaggaggaggaggagag
gaggagcagacctccatctctcctttggaggttctggatcagctgattgttcacggacac
gacgcccatcaacacctgggcaggaggttgtcagcagtgaataagtccgtggatcggagt
aattttggaggtaaacagcagagcatgaaaactaaaggccccgcccagggggaggagctt
cagtcactgaggagtcagctgttattggtccacagtcagctgcagtacgagcggttcaaa
cgccagcagcacgccgtcaggaaccgccgtctgctgcggagagtcatcaacggcacagca
ttggaggagcacgctgtcgccatgaagggtcagctgagcgttcaggacgaggagatccgc
tctctgaagtccagcctgcaggacgaacacagacgacacacacacctgcagcacgacgca
cacacacacacaacccagctgcacacacacaaccagctgctgctgctgcagcaacaggac
gagcagagagacaagctgaggctcaagagcgagctccaggagtgtcagaacaggttaaga
gacctggaggcggagcttcagaaggccaacaacaagtcttacaatgcagaacaccagctg
acacagctgtcactcaagttgtgtagcagtgagcagctgcagcagcagatcttcctgttg
aaccagcagctcgttctgctgagagaaactaacaaagctctgagtgaacatctggaagga
ggacacacacaccaggacacggaggaggccatgctgcagtgcagtctgggtcatgagttc
cagcggctgaaggacagtgacgttcagcagagacagaagctggaagcagccaatcacagg
acggcagagctggaggaccagctggccaagaaggaccagctggtcctggaccagaaaaag
ctcctggaggacaccaagacccagagcagaggcgagctggcggcctgtgagagccgctgt
gaggctttgaggagagtcacccagacgcttcagacggagacgcttcacctgtacagccag
atccacctggaggcgcacagccggcctcaggactttaggccaaacaatgccagcgttgct
gtaccagctcctcagggccacaagccccgccccttctcttcttctgctggtatagtaaac
ggagctgcggcgaccttctccacctcccctctgcacctcctctgctgctcctcctccccc
atgaacctcttctcctgctcctcctcccccctggctgtcggctccttcctggagcagcgt
gcacggcagctgttcagaccgaccaatcacagccaggaggaaggggatgaagagggggag
gaggaggatggggacgaggagaacgaggagcaggaagaagaggaggaggagcagaaggcc
cagccaggtagccctcctctgtgtcaagaagcagagatcctccttgcagggagtcctcag
ccggagccctccagccggacgcgagttcacagccagacctccagccggacctcctctgga
cctccagcacctcctgcagacctgacgctcgctgtccggcagaggaggcacgagctcagc
atcatggattacgatgagacgctgcacgagtag
DBGET
integrated database retrieval system
