Pseudoliparis swirei (Mariana hadal snailfish): 130196776
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Entry
130196776 CDS
T09868
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130196776
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
130196776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
130196776
NCBI-ProteinID:
XP_056275098
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All DBs
Position
7:13511775..13520786
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AA seq
544 aa
AA seq
DB search
MNPSSHQKKKRRSEVEKCPLPVDMDAPERVKKKKKVQREDAVSALLSDADGATGSQKKNM
KKRKEQQQVVTVETSEMEKKKKKDKNGLIEEGVSTVTTDHNHTGTNKSGMKKKKKGGSVV
EGLSQEGEKKRKRKRESGGEMETTGEGKKRKRKASVEEVQSFPKLKELMEFIPDIKNKSV
VQINTLLRYDLHRFKYFKQQGVALRTGRCTQQENQQIRDNVSNFLALTGIGSATELLFPK
RCKDKMAEIKRLKVQYRFMERIAEGIPRTCQTVYGRAKKMFDERNYMGRFSKEELCSLEK
LQSLYGNDWKRIAKKMNRSTMALQKRFAHIAPGHGPWSPDEKSRLKKALKDHLEVLVHHN
SDGPSLSQDQLSTNLPWKKIGQSVGTRSWTQCRIKWFSILKVKLTSGVSTFSRGPEGLES
KIQLIHSLYNMRVEDVADIDWDEVAQTIGNVSNTCVQKTFHRMKVSRVPHWTGLSYGEII
DFLQLKVAPTLKKKLNRLKRESRREEAQGGRTFTLSDVFATHDEDDDYMELDNSQLTTGQ
SGHG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttcctcccaccagaagaagaagagaaggtcagaagtagagaaatgtccttta
cctgtggacatggatgcacctgagagagtcaagaagaaaaagaaggtccagagggaggat
gcggtcagtgctcttctctctgatgctgatggagctacaggaagccagaagaagaacatg
aagaaaagaaaggagcagcagcaagtggtcactgtagaaaccagtgagatggaaaagaag
aagaaaaaagacaagaacgggctgattgaggaaggcgtatccacggtaacaacagaccat
aaccacacaggaaccaacaaaagtggaatgaagaagaagaagaaaggtgggagtgtggta
gaagggttgtcacaggaaggagagaagaagaggaagaggaaacgggagagcggaggagag
atggagacgacaggagaaggaaagaagaggaaacgaaaagcatctgtagaagaagtgcag
agttttccgaagctgaaggagctgatggagttcattccagacatcaagaacaaatcagtc
gtgcagatcaacaccctgctgagatacgacctgcatcgcttcaagtacttcaaacagcaa
ggtgtggctctgcgtacaggacgctgcactcagcaggagaaccagcagatcagggacaac
gtgtctaacttcttggctctgacgggcatcggctcggccaccgagctgctgtttcccaag
aggtgcaaagacaagatggcggagatcaagaggctgaaagtacaatatcgcttcatggag
aggattgctgaggggatccctcgtacatgtcaaacggtttacgggagagccaagaagatg
tttgacgaaaggaactacatgggaaggttctcaaaggaggagctgtgttccctcgagaag
ctccaaagcctctacggtaacgactggaagaggatcgctaagaagatgaaccgcagcacg
atggccctccagaagcgcttcgcccacatcgctccaggtcatggtccctggagtccagat
gagaagtctagattgaaaaaggctctaaaggatcacctggaggttctggtccatcataac
tctgacggtcctagtctgagccaggaccagctgagtaccaacctgccctggaagaagatc
ggccagagcgtcgggacccgatcctggacccagtgtcggatcaagtggttctccatcctg
aaggtcaaactgacttcaggggtcagcaccttcagtagaggacctgaaggacttgaatct
aaaatccagctcatccactcgctctacaacatgcgtgtggaggacgtagccgatatcgac
tgggacgaggtcgcgcagactattgggaacgtgtcgaatacgtgtgttcagaaaactttc
cacagaatgaaagtctccagagttcctcactggaccggtttatcctacggagagatcatc
gacttcctgcagctgaaagtggctccgaccctgaagaagaagctgaaccggctaaagcgg
gagagtaggcgggaggaggcgcagggggggaggaccttcacactgtcagacgtcttcgcc
acacacgacgaagacgacgactacatggagctggacaacagtcagctgaccaccggccaa
tcaggacacggatag
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