Pseudoliparis swirei (Mariana hadal snailfish): 130196811
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Entry
130196811 CDS
T09868
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130196811 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130196811 (dtx1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130196811 (dtx1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130196811 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-UDP
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
130196811
NCBI-ProteinID:
XP_056275156
LinkDB
All DBs
Position
7:complement(6654529..6698409)
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AA seq
642 aa
AA seq
DB search
MARPGSGLLAPGNGLGYPPQNLARVVVWEWKNEHGRWRPYSAAVCHHIENVLKGDVRGTV
VLGQVDAPLSPYVIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNDSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMCQTNRQSQRKRRLRRRMDLAFPLI
MGSIPKSKSWPVGASAGQPCSCQQCILVNSTRAASNAILASQRRKLYGGTAGNPGAAGTL
AVVRQSNTFAGTSLWSPTSASSGPNNINISMGGGQAKAEQVQLPLPSANFPCSPMMPSLS
STHGHHKLNVNGQNNLNRPGTQRISMGTARGAIPQGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVQGINGMRRKTKKKHLRRGKNPEDVVRR
YTDKIKVVPDEDCTICMERLVMSSGYEGILQHKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEFHVIPHCLPGYPDSKAIRIVYDIPAGIQTN
EHPNPGKKFSARGFPRHCYLPDNEKGRKVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLVNVLTELVAQGVGEDNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtccaggatcggggttgctggcgcccggcaacgggttggggtacccccctcag
aacctggccagggtggtggtctgggagtggaagaatgaacatgggcgatggaggccctac
agcgcagcggtttgccaccatattgagaatgtactgaagggggacgtccggggaactgta
gtgctgggccaggtggatgccccgctctctccatacgtcatcgacctgcagtccatgcac
cagtttcgacaggacacaggcaccatgagaccagtgcagaggaacttttacgagccgtcg
tccgctccggggaaaggcgtggtgtgggagtgggagaacgacaacgactcgtggacgccg
tatgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctt
gacctgacttctctgggcttctgctacctcatcgacttcaacagcatgtgtcagaccaac
aggcagagccagcgcaagcgacgcctgcggagacgcatggacctggccttcccgctcatc
atgggctccatccccaagtcgaaatcgtggcccgtgggagccagcgccggccagccctgc
tcctgccagcagtgcatcctggtcaacagtacgagagccgcctccaatgctatcctggcc
tcccagcggcggaagctctacggggggacagcgggaaacccgggcgccgcaggaaccctc
gctgtcgtgcggcagagcaacacctttgctggaacctccctgtggtcgccgacctccgcc
tcctccggccccaacaacatcaacataagtatgggtggtgggcaagccaaagctgagcag
gtgcagttgccgctgccctctgccaacttcccctgttcccccatgatgccatctctttca
tccacccatggccaccacaagctcaacgtcaacggacagaacaacctgaaccggccgggc
acacagcgcatctccatgggcaccgccagaggagccatcccacaaggggttcctgccctc
ccagtaaagaacctgactggatctggacctgtgcacccggcactggcaggtatgacgggt
atcctgatgtgcgctgcaggtctgccagtttgcctgactcgggcccccaagcccatactg
cacccaccacccatcaacaagagcgacatgaagcctgtgcaagggatcaacggcatgcgc
cgcaaaaccaagaaaaagcacctgaggagaggcaaaaacccagaggatgtggtgcggaga
tacacggacaagattaaagtggtgccagatgaggactgtaccatctgcatggagaggctg
gtaatgtcatcaggctatgaaggcatcctgcagcacaaaggcatcaagccagaactagtg
ggcaaacttggcaagtgtgggcacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggatggcagtcttcagtgtccaacatgcaaaaccatttacggtgagaaa
accggcacccagcctcccgggaagatggagttccacgtcatcccccactgcctgcctggc
tacccggactccaaggccatccgcatcgtctacgacattcctgctgggatccagaccaat
gagcacccaaaccccgggaagaagttcagtgcaagagggttccctcgtcactgctacctc
cctgacaatgagaaaggcaggaaggtactgaagctgctgatcatggcctgggaccgacgc
ctcatcttcaccatcggcacgtccagtaccaccggcgagtcggacacggtggtgtggaac
gagattcaccacaagacagaatttggatccaacctgaccggccatggctacccagacccc
aactacctggtcaacgtcctgacggagctggtggcccagggggtcggcgaggacaacttg
aaggactga
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integrated database retrieval system
