Pseudoliparis swirei (Mariana hadal snailfish): 130196834
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Entry
130196834 CDS
T09868
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03267
Virion - Adenovirus
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
130196834 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130196834 (vsig8b)
04517 IgSF CAM signaling
130196834 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130196834 (vsig8b)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
CTX family
130196834 (vsig8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
Ig_C17orf99
Sema4F_C
Ig_PDGFR_d4
DUF4719
Tweety
WBP-1
TMEM154
CD34_antigen
EphA2_TM
Syndecan
Motif
Other DBs
NCBI-GeneID:
130196834
NCBI-ProteinID:
XP_056275196
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All DBs
Position
7:complement(8161529..8166207)
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AA seq
374 aa
AA seq
DB search
MEPVFTVFTGVRLKVAVLFLLTIQLTTDVTEAMQVTSSGPQTTKMAQGKTVILGCTYSPG
SSDTGELDIEWSNISPDMTQKDKLILSHTGGKMHHYGDYGVSKRLTFIGDPMQGDASISF
SDVRLSDTGTYQCKVKKAPGVDMRKVTLVVMVPPSVPKCWVESGEEKGGPVSLRCKSYLG
STPLSYTWKRESGGVIPPTATQDPQTGELLIKNHTDGNIGTYMCEAQNEVGKTQCKYVLH
AYNPTNKAGVIVGAVIGALLLLLLLLFLIWLLICCCHKRRYQKEVANEIREDAQAPESRP
TSRPTSRTSSRASSLRSVMAYRTHPGVQYSSVKKKLPSVRESGPSPVYSGESNGKSTTGG
HPSLKYDHQFGYPV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtattcacagtattcacaggcgtccggctaaaggtggctgtgctgtttctg
ctcacaattcagctgacgacagatgtgacggaggccatgcaggtgacgtcctcagggcca
cagaccactaaaatggcccaggggaagaccgtcatcctgggatgcacctacagccccggc
tcctcagacacgggagagctggacatcgagtggtccaacatcagcccagacatgacacag
aaagacaaactgatcttatcgcacacaggcggcaagatgcaccactacggcgactacggg
gtctccaaaaggctgacattcatcggggaccccatgcagggagacgcttccatctctttc
tctgatgtgaggctctcggacacgggcacctaccagtgcaaagtcaagaaggcgccggga
gttgacatgagaaaagtcactctggtggtgatggttcccccatcggtgccaaagtgctgg
gttgaaagcggagaggagaaaggcggtcccgtctccctccgctgcaaatcatatctggga
tccacgccgctcagttacacatggaagagagagagtggaggtgtaataccacccactgca
acccaagacccacagactggggagctgttgataaagaaccatacagacggcaacatcgga
acgtacatgtgtgaggctcaaaatgaagtcggaaagacccagtgtaaatacgtactgcac
gcatacaacccgaccaataaggcgggcgtcatcgtcggagcggtgattggcgctctcttg
ctgctgctcctcctcctgttcctcatctggctcctgatctgctgttgccataagcgccgc
tatcagaaagaggtcgcaaacgaaataagggaggacgcccaggccccggagagcagaccc
accagcagacccaccagcagaacctccagcagagcctccagcttacgctcggtgatggcg
taccgcacccaccccggggtgcaatacagctctgtgaagaagaagctgcccagtgtcagg
gaatccggccccagtcccgtctactccggcgagagtaacggcaaatcaactactggaggt
catccttccctcaaatacgaccatcaatttggatacccggtgtaa
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