Pseudoliparis swirei (Mariana hadal snailfish): 130196880
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Entry
130196880 CDS
T09868
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130196880 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130196880 (si:dkey-3h3.3)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130196880 (si:dkey-3h3.3)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130196880 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_4
DZR_2
zf-RING_5
zf-RING_10
DUF1272
Zn_ribbon_6
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130196880
NCBI-ProteinID:
XP_056275253
LinkDB
All DBs
Position
7:complement(31412714..31417911)
Genome browser
AA seq
404 aa
AA seq
DB search
MEFITDISVLVPEKYFKDPGRLQKLLLPYGWQKKAGVYAVRGTFEELETLSTSLTEEVDR
ERPAASPHVTPVAVSGVVMAFIHKKHAEELEKIQGSSFSIEELHEPGGTERVVLRPRDAS
SLPVHADLFRQRFVTFYQRTASDLQTASLPPGLDRTDLGARFPELLFEGGPGGGDPTATG
SFVHLAKLKEFLSQSTSSSSTNPVGGAPANTPPVGPGEEEDPCPICMEPMTALDKETLRC
RHSFCTGCLEKAFHYKPVCPTCGALYGALTGTQPDGGEMEVSVTASPLPGYEKYGTITIH
YHIPNGIQKEEHPSPRQPYEGAYRIAYLPDCAEGRRTLELLRRAFHQKLIFTVGQSSTSG
RSNTVTWNDIHHKTSTHGGPTRYGYPDHDYLSRVQEELKLKGIE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagttcatcacggacatcagtgtcctcgtccctgaaaagtacttcaaagaccctggg
agattacagaagcttctcctgccgtacggctggcagaagaaggccggcgtctacgcggtg
agaggaacctttgaggagctggagaccctcagcaccagcctgacggaggaggtggaccga
gagcgtccggccgcctcgcctcacgtcacgcctgtggccgtgtccggggtcgtcatggcc
ttcatccacaagaaacacgccgaggaacttgagaagattcaagggagcagtttctccatt
gaagagctccacgagcccggcggcacggagcgggtggttctccgaccgcgcgacgcctcc
tcgctccccgtccacgccgacttgttccggcagcggttcgtcacgttctaccagaggacg
gcgtccgacctgcagaccgcgtccctgccgcctggtctcgaccgcacggacctgggcgcc
aggttcccggagctcctcttcgaaggcgggcccggcggaggcgacccgacggcgaccggg
tccttcgtgcaccttgctaaactgaaagagttcctttcccaaagcacgtcgagctccagc
accaatccggtgggcggagctccagcgaacacgccgcctgtgggccccggagaggaagag
gacccgtgtcccatctgcatggagccgatgacggccctcgacaaagagactctgcgctgt
cggcactcgttctgcaccggctgcctggagaaggccttccactacaagcccgtgtgcccg
acgtgcggcgcgctgtacggcgccctgacggggacgcagcccgacggaggggagatggag
gtcagcgtcaccgcttcgccgctaccgggatacgagaagtatggaaccatcaccatacac
taccacatcccaaacggcatccagaaggaggagcacccgagcccccggcagccgtacgaa
ggcgcgtaccgcatcgcctacctaccagactgcgctgagggccggaggaccctggagctg
ctgaggagggccttccaccagaagctcatcttcaccgtgggccagtcctccaccagcggc
aggagcaacacggtgacgtggaacgacatccaccacaagacgtccacccacggaggcccg
acccgatatggataccccgaccacgactacctgagccgagtgcaggaggagctgaagctc
aaagggattgaatga
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integrated database retrieval system
