Pseudoliparis swirei (Mariana hadal snailfish): 130196907
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Entry
130196907 CDS
T09868
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130196907 (sart3)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130196907 (sart3)
Spliceosome [BR:
pswi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130196907 (sart3)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
130196907 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
HAT_PRP39_C
LSM_int_assoc
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
Lsm_interact
FAT
Motif
Other DBs
NCBI-GeneID:
130196907
NCBI-ProteinID:
XP_056275291
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All DBs
Position
7:18064429..18073194
Genome browser
AA seq
931 aa
AA seq
DB search
MAASSDEEETHLQDMEEVDAGIEKRKMGSDGEEEAEEEGMGEEHSEEEEDEGNSSEDEKE
NEAEIQRLEEQLSINAFDYNCHVDLIKLLKQEGELLRLRKARQKMSELFPLTEEIWLDWL
KDEIRLTEEEPNREKVYELFETAVIDYICPEIWLEYAQYSIGGMGSPGGIDKVRSIFERA
VTAVGLHMTKGHVVWEAFREFENVMLSTVQPPHGQILNQEEQEQLKAQIERLHTLFRRQL
AIPFMDMEATYAEYEEWSEDGVADTVIHQYKKALQQTAKCKSFEEALLVAEPPKLAEYQS
YIDFELKEGDPARVQIIFERTLAENCLVPDVWAKYTTYLNRQLKIKGMVLSSHERAVRNC
PWTMGLWKSYLQALERHGADHQTVSDLFETALKAGFIQATDYVEIWQAYLDYLRRRVDFS
KESSKELEELRGAFSRSLDYMKQDVEERFGESGDPSCIIMQIWARIEALHCKNIQKAREL
WDSIMTKGNAKFANMWLEYYNLERSYGDPLHCRKALHRAVQCTADYPEHVSEVLLTFERV
EGSLEDWDVAVQKTETRLNRINVQRAKAAEKEANLAGQDVGRADQRRNTKMDKKGPKNAQ
KGTRAGEKRKAEQYDNTGTKRHRGNGNQLPEHMETEAGLSGRNAPPGYKPALHGNKRAAA
AVNKPDDDDDKPELRNDSSSVFISNLAYTLEEPEAKLRTQFESCGPITQIRPVFATKGNF
KGYGYVQFESTVSVAEALKLDRREVEGRPMFVSPCVDKNKNPDFKMFKYNTAMEKQKIFI
SGLPFSCSKEQLEEICKSHGTIKDIRLVTYRSGKPKGLAYVEFEDEAQASQAVLKLDGMC
VEDNTISVAISNPPSRNVDKPGPSRLMADMPRQVFGSRGRARTQLSLLPRSLHRQNAAVG
KAENGTAATSSAAGETKPLSNSDFARMLLSK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcaagcgacgaagaggaaacgcatttgcaagacatggaggaggtagacgca
gggatagagaagagaaaaatgggatcggacggagaagaagaggcggaggaggagggtatg
ggagaagaacattcagaagaggaagaggatgaggggaactcgtcggaagacgagaaagag
aacgaagcagaaatccaacgattggaggagcagctgtcaatcaatgctttcgactacaac
tgccacgttgatctcatcaagctattgaagcaggagggagaacttctccgtctgcgaaag
gcaaggcagaaaatgagtgaacttttcccactcactgaagagatctggctggattggctc
aaggatgaaatccgtctgactgaagaggagccaaaccgggagaaagtatatgaacttttt
gagacggctgtcatcgactatatctgtccagagatctggcttgaatatgctcagtattca
attggtggcatgggctcaccaggtgggatagacaaagtgagatccatctttgagagggct
gtgacggctgtgggactacacatgaccaagggacacgtggtgtgggaagcgttcagagag
tttgagaacgtcatgctttccaccgtccagcctccacatggacagattcttaatcaggag
gagcaggaacagctgaaagctcagattgagcgtctccatacactgttccgccgccagctg
gccattccttttatggacatggaagccacgtatgcagagtatgaagagtggtctgaagat
ggggtggcggacacggtcatacaccagtacaaaaaggctttgcagcagacggcgaagtgc
aagtcttttgaagaagccctgttggtagcagaacctcctaaactggcagagtatcagtcc
tacattgactttgaactgaaggagggcgacccggcccgggtccagatcatctttgagcgg
actctagcggagaactgccttgtcccagacgtgtgggcaaaatacaccacctatctgaac
cgtcagctgaagatcaaaggcatggtcctctcctctcacgagcgtgcagtcaggaactgc
ccctggacgatgggtctgtggaagagctacctgcaggctctggagcggcacggagccgac
caccagacggtctcagatctttttgaaacggcgttgaaagccggtttcattcaagcaacg
gattatgtggaaatttggcaggcatacctcgactatctgaggagacgtgtggatttcagc
aaagaatcaagtaaagagttggaggagctacgaggagctttctctcgctctctagactac
atgaagcaagatgtggaagaaagatttggtgaaagtggagatccttcttgtatcataatg
cagatctgggcgaggatagaggccctccactgcaagaacatccaaaaagccagagagctg
tgggacagcatcatgacaaaggggaacgctaagtttgccaacatgtggctggagtactat
aaccttgagaggtcctatggagacccgctccactgtcgcaaagctctccacagagcagtg
cagtgcaccgcagactacccggagcatgtgagtgaagtcctgctcacatttgagagggtt
gaaggctctcttgaggactgggacgtggcggtgcagaagacggagacccggctgaatagg
attaatgtgcaacgggcaaaggcggctgagaaagaggccaacctggctggccaagatgtt
gggagagctgatcagcggcgaaataccaagatggacaagaagggtccgaagaatgcccag
aagggaactcgagctggggagaagagaaaagcagagcagtacgataacactggtactaaa
aggcacagagggaatgggaaccaactgccagagcacatggagaccgaggcgggactctct
gggaggaacgccccccccggctataagcccgctctacacggcaataaaagagcggcggcc
gctgtcaacaaaccggacgatgacgatgacaagccagagctccgcaacgatagcagcagc
gtcttcatcagcaacctggcgtacaccctggaggaacccgaggccaagctgaggacgcag
tttgagagctgtgggcccatcacacagattcgcccggtcttcgccaccaaagggaacttc
aaaggctacggctacgtccagtttgaatccacggtgtccgtggctgaagccttgaagctg
gacagacgggaggtggagggcaggcccatgtttgtgtccccgtgtgtcgacaaaaacaag
aatccagactttaagatgttcaaatacaacacggccatggagaagcaaaagatcttcatc
tccgggctgccgttctcgtgcagcaaagagcagctcgaggaaatctgcaaaagtcacggc
accatcaaagatattcgtctggtcacgtaccgctcggggaaacccaagggtctggcgtac
gtggagtttgaagatgaagctcaggcttctcaagccgtcctgaagttggacggcatgtgt
gtcgaggacaacaccatctctgttgccattagcaaccctccgagcagaaacgtggataaa
cccggtcccagcaggctcatggcggacatgccgcggcaggtctttggatcgagaggacgg
gcacgcacccagctctcgctcctccctcgctccctgcaccgacaaaatgcggcagttggc
aaagcggagaatggcaccgcggcaacgagcagcgcggccggagagacgaagccgctgtcc
aattcagactttgcccggatgcttctcagcaagtga
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