Pseudoliparis swirei (Mariana hadal snailfish): 130196909
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Entry
130196909 CDS
T09868
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
pswi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130196909 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
130196909 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130196909 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130196909 (gtf2h3)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130196909 (gtf2h3)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130196909 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
130196909
NCBI-ProteinID:
XP_056275293
LinkDB
All DBs
Position
7:18999772..19004781
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AA seq
300 aa
AA seq
DB search
MASEEEINLLVIVVDVNPIWWGQQAQRATELTLSKCLDAVMVLGNSHMAMARTNKLSVIA
SHFEDSHFLYPGKSWRMGDSCGEDASSSGDGKYELLAVANNLIAEEIRKVMSKTEVRGNS
TDTLLAGTLAKALCYINRVSKEFEVGQEIKSRILVIKAAEDCTHQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQPT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaggaagaaatcaatctgctggtcatcgtcgtggatgtgaatccgatatgg
tgggggcagcaggctcagcgtgccacggagctcaccttgtccaagtgtctggacgcagtc
atggtgttgggcaactcccacatggccatggccaggacgaacaagctgtcggtcatcgcc
agccactttgaagacagtcacttcctgtatcccggcaagagctggagaatgggggacagc
tgtggggaggatgcatcctccagtggggatgggaaatatgaactcctagcagtcgccaac
aaccttattgctgaagagatcaggaaggttatgtcaaaaactgaagttcggggaaattca
actgataccttgttggctggaacccttgccaaagctctctgctatattaacagggtctca
aaagaatttgaagttggacaggagataaaatcaagaatattggttataaaagctgccgag
gactgtacccaccagtacatgaacttcatgaatgtcatttttgctgcccaaaagcagaac
atcctgattgatgcctgcgtgttggactcagactcgggtctccttcagcaggcttgcgat
ataactggaggattgtacctcaagattccacagaaagttgccctggcacagtacctgttg
tgggtgttcctgcctgactctgagcagcgctcccagctggtgctgccaccgcctgcacac
gtggactacagagcggcatgtttctgccaccgtaacctcattgagattggttacgtgtgc
tcagtttgtctgtcgatattctgcaacttcagccccatctgcacaacatgcgagaccgcc
ttcaaaatccaactaccgcagatggtcaagcccaaaaagaagaaactcaagcaacctaca
tga
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