Pseudoliparis swirei (Mariana hadal snailfish): 130196915
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Entry
130196915 CDS
T09868
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pswi01100
Metabolic pathways
Module
pswi_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130196915
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130196915
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
130196915
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
130196915
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130196915
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATP-synt_D
PycTM
FlxA
Motif
Other DBs
NCBI-GeneID:
130196915
NCBI-ProteinID:
XP_056275311
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Position
7:25777441..25783429
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AA seq
538 aa
AA seq
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MFKRWLLALLARVGLIVLGLCCCLALFYLLACKPTSPRSQPSPLWSGGAASKEGYLALLQ
EREDSHRHYINSLTKQIAQLKEALRERTRQLQESLDKAKTRGILPQGLESLHKIPTQTDL
KDFFRSQLNQAEVISGVQLPSEYALVPFDTFTLRRVYQLETGLTRHPEERPVRRDRRDEL
ISAVETALHVLNGPQQHTDDTRRKNTYYPSDFVEGLTRTERDRGTVYELTFKGAGPRDFT
QLVLFRPFGPVMKVKSESVDTRGTLINIIVPLSKRPDAFKQFINNFREVCIQQDGRVHLT
VVYFGRDQIDRVKATLDQTTRETRFRSFTLIQLNEEFSRGRGLEVGARAWRRSQNVLLFF
CDVDIHFTADFLTSCRLNAAPGKRVYYPVLFSQYNPSMIYSNQTRLPSVQQQLVMRKDTG
FWRDFGFGMTCQYRSDFLNIGGFDRNIKGWGLEDVHLYRKYLHSKLMVIRSPSRGLFHLW
HEKNCADQLPADKYKMCMQTKAMSEASHGILGELFFKREIELHLSSQKQRNIMTRTIK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcggtggcttttggccctgttggcgcgggtcggcctcatcgtgctcggcctc
tgctgctgcctggccctgttctacctgctcgcctgtaaaccgacgtcacccagaagccag
ccgtctccgctgtggtcgggaggggccgccagcaaggagggatacttggccttgttgcag
gagagagaggactctcacagacattacatcaatagcctgacgaagcagatagcccagctg
aaggaggcgctccgggagaggacgcggcagctccaagagtccctggacaaagcgaaaaca
agagggattctgcctcagggtctggagagtctgcacaagatcccgacacagactgacctc
aaggatttcttccgctcacagctgaaccaggcggaggtgatctcaggtgtacagctgccc
agcgaatacgcactggtaccttttgacacgttcaccctgcggagggtgtaccagctggag
acggggctgacgaggcacccggaggagaggcctgtgaggagagaccgcagagacgagctg
ataagcgcggtggaaaccgctctgcacgtcctgaacgggcctcagcagcacacagacgac
accagacggaagaacacatactacccgtccgacttcgtagaggggttgacgcgcacggag
cgggacagaggaaccgtttacgagctgacgttcaaaggcgccggcccgcgagacttcaca
cagctcgtgctcttcaggccgtttggtcccgtgatgaaggtgaagagcgagagcgtggac
acccgcggcaccctcatcaatatcatcgtacctctctccaagaggccggacgcgttcaaa
cagttcatcaacaacttcagagaagtgtgtatccagcaggacggcagggttcatctgact
gtggtctactttggccgagatcagatagatcgggtgaaggccactctggaccagaccacc
agagagactcggttcaggagcttcactttgatccagctgaacgaggagttttctcgtgga
cgcggtttagaagtgggcgccagggcgtggaggcggagccaaaacgtcctgctcttcttc
tgtgacgttgacatccacttcaccgccgacttcttaacttcttgtcgtctcaacgcagcg
ccggggaagagagtgtactacccagtgctcttcagccagtacaacccgtctatgatctac
agcaaccagactcgtctgccctctgttcaacaacaactggtgatgaggaaagacactgga
ttctggagagactttgggtttggcatgacgtgccagtacaggtcggatttcctcaacata
ggtggttttgaccgtaacatcaaaggttgggggttggaggacgtgcacctgtacaggaag
taccttcacagcaagctgatggtgatccgctctccgtctcgagggcttttccacttgtgg
cacgagaagaactgcgcagaccagctccctgcagacaagtacaagatgtgcatgcagacc
aaagccatgagcgaggcctcgcacggcattctgggagagctgttcttcaagcgggaaatt
gagcttcatctgagctcccagaagcagaggaacatcatgacgaggacaatcaaatag
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