Pseudoliparis swirei (Mariana hadal snailfish): 130197026
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Entry
130197026 CDS
T09868
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130197026
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130197026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
SWIRM
DAO
Pyr_redox_2
HI0933_like
Pyr_redox
Thi4
Pyr_redox_3
FAD_binding_3
FAD_binding_2
FAD_oxidored
Lycopene_cycl
GIDA
AlaDh_PNT_C
NAD_binding_9
TrkA_N
MurD-like_N
zf-RING_2
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
130197026
NCBI-ProteinID:
XP_056275457
LinkDB
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Position
1:3564459..3573420
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AA seq
835 aa
AA seq
DB search
MLSDADYSGNAPGNARRARKRSSGESPADGQTLRSSGRQSTVRVKRTNNPPPGQSKRKAT
DTEEEDDPSEKKYRKCEKAGCSATYPVCFASASDRCAKNGYTSRWYHLSCGEHFCNECFD
HYYRSHKDGYEVFALWKKVWTSNGKSEPSLKAFMADQQLPFWVQCTKPDCGKWRQLTKDI
QLTASLAAAYRCGMKFNNIKSEGLDHCSQPEDLRVAEVSESWWHSMLILPPLFKDSPAGP
FLAAYYPDCVGMSPSGAAGNPSPAELRADHCRAVPPQIPGLCPYFQPFYQPNECGKALCV
RPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRNCKEVLTTQTCGVHIVARGLVRVR
CVQELDRVLHFMTRKGLINTGVLAVKRPLLPQRHGSRSVIVIGAGASGLAAARQLQNFGT
RVVVLEARERIGGRVWDDTSLGATVGRGAQIVNGCVNNPVALMCEQMGIKMRKLGERCDL
FQEGGQVTDPAIDKRMDFHFNAILDVVSEWRKDKSQSQDAPLRDKVQEVKKNFLQESGIQ
FSELEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHALLAQGYSAVLHKLA
EGLDIRTKCPVQAVDYSGDVVKVTASNGSQWTAQKVLVTVPLTLLQKNSIQFQPALPERK
LKAIHSLGAGIIEKIALQFPYRFWDKKIQGADYFGHIPPGPDSRGMFSVFYDMEPQGKQA
VLMSVITGDAVAAVRDMEDRQVVDECMKVLRELFKEQDVPEPLRSLVTHWSRDPWSQMSY
SFVKTGGSGEAYDVLAEDVQGRVFFAGEATNRHFPQTVTGAYLSGVREASKMAAM
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggacgcagactattccgggaatgcccccgggaatgctcggcgagccaggaag
aggagctccggggagtccccggcggacggccagacgctgcgctcctccgggaggcagagc
accgtgcgcgtgaagcgcaccaacaaccctccacctggacagagcaaaagaaaagccacg
gacacggaggaggaagacgacccgtcggagaagaagtacaggaagtgtgagaaggcggga
tgctccgccacgtacccagtttgctttgcgagcgcctctgacaggtgcgctaaaaacgga
tacacgtcccgctggtaccacctgtcatgcggtgagcatttttgcaacgagtgtttcgat
cactactaccgcagtcacaaagatggctacgaggtctttgctctgtggaagaaggtgtgg
accagtaacgggaaaagtgagcccagtctgaaagccttcatggccgatcagcagcttcca
ttctgggtccagtgtacgaagccggactgtggcaagtggcgccagctgaccaaggacatc
caactcacggcctcacttgcggccgcgtaccgctgtgggatgaagttcaacaacatcaag
agcgaggggttggaccactgctcccaaccagaggacttgcgggtggccgaggtgtccgag
agctggtggcactccatgttgattttgccgccgttgttcaaagacagccccgccggcccc
ttcctcgccgcctactaccccgactgcgtggggatgagtccgtcgggcgccgccggcaac
ccgtctccggccgagctccgggcggaccactgccgagccgtcccgccgcagattccaggc
ctgtgtccgtacttccagcccttctaccagcccaacgagtgcggcaaggctctgtgcgtc
cggccggacatgatggagctggacgagctctacgagttccccgagttctcccgcgacccc
accatgtatttggcattgcgcaacctcatcctggcctcctggcacaggaactgcaaggag
gtgctgacgacccagacgtgtggcgtgcacatcgtcgcccgggggctggtgcgcgtgcgc
tgcgtgcaggagttggaccgcgtgctccacttcatgacccggaagggcctcatcaacacc
ggcgtgctggcggtgaagcggcccctgctcccgcaacgccacggctccaggagcgtcatc
gtcatcggcgccggggcttcggggctggctgctgcgcggcaactgcaaaactttggcact
cgggtggtggtgctcgaggcgagggagaggatcggcgggcgcgtgtgggacgacacgtct
ctgggcgccaccgtgggccggggggctcagatcgtcaacggctgcgtgaacaaccctgtt
gccctcatgtgtgaacagatgggcatcaagatgcgcaagctgggcgagcggtgcgacctc
ttccaggagggggggcaggtcaccgacccggccatcgacaagcgcatggacttccacttc
aacgccatcctggacgtggtgtcggagtggaggaaggacaagtcccagagccaggacgcg
cctctgagagataaggtccaggaggtgaagaagaacttcctccaggagtctgggatccag
ttcagcgagttggaggagaaggtgcttcagttccacctcagcaacctggagtacgcctgc
ggcagcacgctggaccaggtatcggcgaggtcttgggaccacaacgagttcttcgcccag
ttctcaggagaccacgcgctgctcgcccagggctactccgccgtgctccacaagctggcc
gagggcctggacatccgcaccaagtgcccggtccaggccgttgattactcgggtgacgtc
gtcaaggtcaccgcctccaacgggtcccagtggacggcgcagaaggttctggtgaccgtc
ccgttgactttgctccagaagaactcgattcagttccagccggcgctccctgaaaggaag
ctgaaggcgatccacagtctgggagccggcatcatcgaaaagatcgcgctccagttcccg
taccggttctgggacaagaagatccaaggggcggactacttcggtcacatccccccgggg
cccgacagcagaggcatgttcagtgtcttctacgacatggagccacaggggaagcaggcc
gtcctcatgtccgttatcactggtgatgctgtggctgctgtccgggacatggaggaccgg
caggtggtggacgagtgcatgaaggtgctgcgggagctcttcaaagagcaggacgtcccg
gagccgctgcgttccctggtcacccactggagcagagacccgtggtcccagatgtcctac
agcttcgtgaagacggggggcagcggagaggcctacgacgtcctggccgaagacgtgcag
gggagagtcttcttcgccggagaggccaccaacagacatttccctcagacggtgacgggg
gcctacctgagcggggtgagagaggccagcaagatggctgccatgtga
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