Pseudoliparis swirei (Mariana hadal snailfish): 130197066
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Entry
130197066 CDS
T09868
Symbol
tcf7l1b
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
KO
K04490
transcription factor 7-like 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
pswi04520
Adherens junction
pswi04916
Melanogenesis
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130197066 (tcf7l1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130197066 (tcf7l1b)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
130197066 (tcf7l1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130197066 (tcf7l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130197066 (tcf7l1b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
130197066 (tcf7l1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130197066
NCBI-ProteinID:
XP_056275532
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All DBs
Position
7:5462290..5495574
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AA seq
577 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENVSADRDLDDVKSSLVNESENNSSSSD
SEQAERRPQTRPDLESYEKARDYFNEALRRQQDGGFFKSPHYPGYPFLMIPDLSNPYLSN
GSLSPSARTYLQMKWPLLDVPGSAGLKDSRSPTPGHLSNKVPVVQHAHHVHPLTPLITYS
NEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGSIAHPLGWFMQQQGQ
PMYSIPPGGFRHPYPALAMNASMSSLVSSRFSPHMVTSPHSLHQSGIPHPAIVSPVIKQE
PCDMSPSMHARKSPVPPKKEEDKRPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
LGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDNKPDSKPEDFS
IRNKKQCVQYLPSDKMCDSPASSHGSMLDSPATPSASLASPAAPAATHSEQAQPLSLTTK
PEGRMHHHHFSLSGKASGSTSSSSSSSSSSSSHTHHSIPIGTSGSQSTTPILSRPIPFAS
LHPSMLSPPSPFHQAALHSHHALFQSQPLSLVTKPTE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttaaacggaggcggtggggatgatttgggggccaatgacgagatgatatct
tttaaagacgagggcgagcaggaggaaaagatatccgaaaatgtgtcagcggacagggat
ttggatgatgtgaaatcctccttggtgaacgagtcagaaaacaacagcagctcatccgac
tcagagcaagcagagaggcgcccccaaaccagacccgacttagaaagttatgagaaagcc
agagactacttcaatgaagcgctgaggagacagcaagatggtggcttttttaagagtcct
cactatcctggctacccgtttctcatgatcccggacctctccaacccctacctatcaaac
ggctctctgtctccgagtgcaagaacatacctgcagatgaaatggcctcttttggacgtt
cctggatctgcaggactgaaagactcccgttctccaactccggggcatttatccaataaa
gtcccggtggtgcagcatgcccaccacgtccacccgctgacacccctcatcacctacagc
aatgaacacttctcccccgggacgcccccgtcacacctctccccggagatcctcgaccca
aagacaggtattcctcggacacctcacccgtcagagctctctccgtactacccgctgtct
ccaggtgctgttggttccatcgcacacccgctgggctggttcatgcaacagcagggccag
cccatgtactccatccctccggggggattccgtcacccctatccggcgctggcgatgaat
gcatccatgtccagcttggtgtccagccgcttctcccctcacatggtgactagtccgcac
agcctccaccagtccggcattccccatcccgccatcgtctccccggttatcaaacaggag
ccctgtgacatgagcccttccatgcacgccaggaaatcccccgttcctcccaagaaagaa
gaggacaagaggcctcatatcaagaaacctctgaatgctttcatgctgtatatgaaggag
atgagagccaaagtagtggcagagtgcactctgaaggagagcgctgccatcaaccagatc
cttggaagacggtggcattccctgtcaagagaggaacaagccaaatactacgagctggcc
aggaaagagaggcaactccactctcagctgtatccagggtggtcagcgagagataactac
ggaaagaggaaaaagaggaagagggacaataaacccgactcaaaaccagaagacttttcg
ataagaaacaagaagcagtgcgtgcagtacctgccctcggacaagatgtgcgacagcccg
gcgtcgtcccacggcagcatgctggactcgccggccactccctccgcgtccttggcttct
ccggccgctcccgccgccactcactccgagcaggcccagccgttatcgctcaccaccaaa
ccggagggacgcatgcaccaccaccacttctccctatccgggaaggcttctggatccaca
tcctcttcttcctcctcctcctcttcctcctcctcccacacccaccactcaatcccaatt
ggtacttcaggtagccagtcgaccacacccatcctcagccggccaatccccttcgcctct
ctgcacccctccatgctctcccccccttcccctttccatcaggcggcccttcactcccat
catgccctgttccagtcgcagcccctctccttggtaaccaaaccaaccgaatga
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