Pseudoliparis swirei (Mariana hadal snailfish): 130197126
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Entry
130197126 CDS
T09868
Symbol
efna1a
Name
(RefSeq) ephrin-A1a
KO
K05462
ephrin-A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130197126 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130197126 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130197126 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130197126 (efna1a)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Growth factors (RTK binding)
130197126 (efna1a)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130197126 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130197126 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
130197126
NCBI-ProteinID:
XP_056275617
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All DBs
Position
1:complement(7901947..7916445)
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AA seq
220 aa
AA seq
DB search
MDLVWIAGFLVSVCARFASAERHSVYWNSTNPKFLWDDYTVEVKLNDYLDIVCPHYPEGE
VPLLDAERYVLYMVEREDYDSCKPESYDQMRWECGHPFAPHAPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKQLHHHGQECLRLRVDVEAADGSQEARVAKGGGGRGGVHNPSNRLPAA
DDPVVVLPDVQKSVRSNCVAAAALSVLALLVSSSLLLLLH
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtctggattgcgggcttcctggtgagcgtctgcgcccggttcgcgtcagcg
gagcggcacagcgtctactggaacagcacgaaccccaagttcctatgggacgactacacc
gtggaggtgaagctcaacgactacctggacatcgtgtgcccgcattaccccgagggcgag
gtgccgctgctggatgccgagcgctacgtgctctacatggtggagcgcgaggactacgac
tcctgcaagccggagtcgtacgaccagatgcgttgggagtgcggtcacccgtttgccccc
cacgccccggagaagttctccgagaagttccagcggttcaccccgttcactctggggaag
gagtttcgtcaaggagaaagctactattatatctccaaacagttgcaccaccatggacag
gagtgcctcaggctccgggtggacgtagaagctgctgatggctctcaagaggccagagtg
gctaaaggaggcgggggtaggggtggggttcacaacccgtccaacagactgcctgcagca
gacgacccggtggtcgtcctgccggacgtgcagaagagcgtgcggtcgaactgcgtggcg
gcggcggccctctcggttctcgccctgctcgtctcatcttcactactgctgttgttgcac
tga
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