Pseudoliparis swirei (Mariana hadal snailfish): 130197176
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Entry
130197176 CDS
T09868
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130197176 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130197176 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130197176 (tars1)
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
130197176 (tars1)
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130197176 (tars1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130197176 (tars1)
Prokaryotic type
130197176 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
130197176
NCBI-ProteinID:
XP_056275697
LinkDB
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Position
7:complement(23142603..23158442)
Genome browser
AA seq
724 aa
AA seq
DB search
MAEQTVDEKMSKLSVDEKKKGGTEGAKDGGKKKAKGAAGESGGRSELTPAPEYIDERLTL
YTKLKAEHDALQEERAAENSRAIKVTLPDGKEVDAESWKTTPYQVACGISQGLADGTVIA
KVNGSVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHILGEAMERVYGGCLCYGPPID
SGFYYDMFLENSEGVSSNDFPGLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRI
LNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYG
ISFPDPKMLKEWEKFQEEAKNRDHRKLGRDQDLFFFHDLSPGSCFFLPNGAYIYNTLIEF
IRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCLM
FDHRPRSWRELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGC
LDFLRAVYEVFGFTFKLNLSTRPEKFLGEPAIWEEAEKQLENSLNEFGEKWVLNPGDGAF
YGPKIDIEIKDAIGRYHQCATIQLDFQLPIRFNLSFVSQDGDDKKRPVIIHRAILGSVER
MIAILTENYGGKWPLWLSPRQVMVVPVGPTCEEYARKVQQEFHSSGFMSDVDLVPGCTMN
KKIRNAQLAQYNFILVVGEKERTSDTVNVRTRDNKVHGERTVEECVERLKQLKCSRSRNA
EEEF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagactgtcgatgagaaaatgagcaaattgagcgtggacgagaagaaaaag
gggggaactgaaggcgcgaaagatggaggaaagaagaaggccaaaggtgcagctggggag
tctggaggcagatctgagctgacgccagcacccgagtacatcgatgagcgtcttactctg
tacactaagctgaaagcggagcacgacgctctgcaggaagaaagggctgcggagaacagc
cgagccatcaaggtgactctgcccgacggaaaggaggtggacgccgagtcctggaagacc
acgccgtaccaggtggcctgtggaatcagtcaaggcctcgccgacggcacggtgattgct
aaggtgaacggcagtgtgtgggacctggacagaccactggaggaagactgcagccttcag
ttgctcaagtttgatgatgaggaggctcaagctgtttactggcactccagcgctcacatc
ttgggtgaagccatggagcgggtgtacggaggctgcctctgctacggtccccccatcgac
agtggcttctactacgacatgttcctggagaacagcgagggcgtgtcaagcaatgacttt
ccaggcctggagaccttgtgcaagaaaatcatcaaggagaagcagccattcgagaggctg
gagatcaagaaggaaactcttttggaaatgttcaagtacaacaagttcaagtgccgcatt
ctgaatgagaaggttaccacccccaccaccaccgtttacaggtgtggtcccttaatcgac
ttgtgtcgtgggccccatgtgagacatacaggaaaaatcaaggctcttaaaatccacaag
aattcatctacatactgggagggtaaggcggacatggaaaccctccagaggatctatggg
atctccttccccgaccccaagatgctcaaagagtgggagaagtttcaggaggaggccaag
aaccgagatcaccgcaaactgggccgggatcaggacctgttcttcttccatgacctgagt
ccagggagctgcttcttcctccctaacggggcctacatctacaacaccctgatcgagttc
atcaggagtgagtaccggaagaggggattccaggaggtggtgacgcccaacatctacaac
agcaagctgtggcagacctccggccactggcagcactacagcgagaacatgttctccttc
gaggtcgagaaggagaccttcgccctcaaacccatgaactgcccgggacactgtctgatg
ttcgatcaccggccgcgctcctggagagagttgcccattcgcatggccgacttcggcgtc
ctgcacaggaacgagctgtcgggagccctgacgggcctcacccgcgtccgccgcttccag
caggacgacgcccacatcttctgcaccatggaccagatcgaggaggagatcaagggctgc
ctggacttcctgcgggccgtgtacgaggtgttcggcttcactttcaaactcaacctctcc
accaggccggagaagtttctgggggagccggccatctgggaggaggcagagaagcaactg
gagaacagcttgaatgaatttggggagaagtgggtcctcaaccccggcgacggcgcattc
tacgggccgaagatcgacatcgagatcaaggacgccatcggccgctaccatcagtgtgcc
accatccagctggacttccagctcccgatccgcttcaacctctccttcgtcagccaagat
ggcgacgacaagaagagacctgtgatcatccacagagccatcctgggctcagtggagagg
atgatcgccatcctgaccgagaactacggaggcaaatggccgctgtggctctctcctcgc
caggtgatggtcgttcccgtggggccgacctgtgaggaatacgctcgcaaggtccagcag
gagttccacagcagcggcttcatgagcgacgtggacttggtccccggctgcaccatgaac
aagaagatcaggaacgcacagctggcgcagtacaacttcatcctggtggtgggagagaag
gagaggacgagcgacaccgtgaacgtgcgcacccgcgataacaaagtgcacggcgagcgc
acggtggaggagtgcgtcgagcgcctgaagcaactcaagtgcagcaggagtcgcaacgcc
gaggaggagttctga
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